This is an actively curated collection of open source frameworks for building multicellular simulations in biology.
This is an actively curated collection of open source frameworks for building multicellular simulations in biology. If you spot a software framework that should be included here, please contact Paul Macklin. See http://MathCancer.org/Contact.php.
Main image credit: | A discrete simulation of immune cells (red) attacking a tumor with heterogeneous immunogenicity (shaded from blue to yellow). Simulated in PhysiCell by Ghaffarizadeh et al [1]. [1] http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005991
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Background image credit: | A discrete simulation of cancer metastases growing in liver tissue. Simulated in PhysiCell [1] [1] http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005991 |
Keywords: | agent-based model, simulation, computational biology, discrete model, individual-based model |
DOI: | 10.14293/S2199-1006.1.SOR-UNCAT.CLYWCCG.v1 |