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      A DNA test to sex most birds.

      Molecular Oncology
      Animals, Avian Proteins, Base Sequence, Birds, genetics, Chickens, DNA, analysis, chemistry, DNA Primers, DNA-Binding Proteins, Electrophoresis, Agar Gel, veterinary, Electrophoresis, Polyacrylamide Gel, Female, Introns, Male, Mice, Molecular Sequence Data, Polymerase Chain Reaction, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Sex Chromosomes, Sex Determination Analysis

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          Abstract

          Birds are difficult to sex. Nestlings rarely show sex-linked morphology and we estimate that adult females appear identical to males in over 50% of the world's bird species. This problem can hinder both evolutionary studies and human-assisted breeding of birds. DNA-based sex identification provides a solution. We describe a test based on two conserved CHD (chromo-helicase-DNA-binding) genes that are located on the avian sex chromosomes of all birds, with the possible exception of the ratites (ostriches, etc.; Struthioniformes). The CHD-W gene is located on the W chromosome; therefore it is unique to females. The other gene, CHD-Z, is found on the Z chromosome and therefore occurs in both sexes (female, ZW; male, ZZ). The test employs PCR with a single set of primers. It amplifies homologous sections of both genes and incorporates introns whose lengths usually differ. When examined on a gel there is a single CHD-Z band in males but females have a second, distinctive CHD-W band.

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          A mammalian DNA-binding protein that contains a chromodomain and an SNF2/SWI2-like helicase domain.

          Two overlapping cDNAs that encode a 197-kDa sequence-selective DNA-binding protein were isolated from libraries derived from mouse lymphoid cell mRNA. In addition to a DNA-binding domain, the protein contains both a chromodomain, which occurs in proteins that are implicated in chromatin compaction, and an SNF2/SWI2-like helicase domain, which occurs in proteins that are believed to activate transcription by counteracting the repressive effects of chromatin structure. A Southern blot analysis indicated that this protein, which we have named CHD-1, for chromodomain-helicase-DNA-binding protein, is present in most, if not all, mammalian species. A Northern blot analysis revealed multiple CHD mRNA components that differed both qualitatively and quantitatively among various cell types. The various mRNAs, which are probably produced by alternative RNA processing, could conceivably encode tissue-specific and developmental stage-specific isoforms of the protein. Based on its interesting combination of features, we suspect that CHD-1 plays an important role in gene regulation.
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            A Classification of the Living Birds of the World Based on Dna-Dna Hybridization Studies

            We present a classification of the living birds of the world based on the results of DNA-DNA hybridization studies. Several family-group names are presented formally for the first time; some of these names have appeared earlier in various publications.
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              Heterochromatic nature of W chromosome in birds.

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