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      Escaping the curse of dimensionality in estimating multivariate transfer entropy.

      Physical review letters
      Algorithms, Entropy, Models, Theoretical, Nonlinear Dynamics, Stochastic Processes

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          Abstract

          Multivariate transfer entropy (TE) is a model-free approach to detect causalities in multivariate time series. It is able to distinguish direct from indirect causality and common drivers without assuming any underlying model. But despite these advantages it has mostly been applied in a bivariate setting as it is hard to estimate reliably in high dimensions since its definition involves infinite vectors. To overcome this limitation, we propose to embed TE into the framework of graphical models and present a formula that decomposes TE into a sum of finite-dimensional contributions that we call decomposed transfer entropy. Graphical models further provide a richer picture because they also yield the causal coupling delays. To estimate the graphical model we suggest an iterative algorithm, a modified version of the PC-algorithm with a very low estimation dimension. We present an appropriate significance test and demonstrate the method's performance using examples of nonlinear stochastic delay-differential equations and observational climate data (sea level pressure).

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          Most cited references15

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          Causation, Prediction, and Search

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            Graphical interaction models for multivariate time series 1

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              Partial mutual information for coupling analysis of multivariate time series.

              We propose a method to discover couplings in multivariate time series, based on partial mutual information, an information-theoretic generalization of partial correlation. It represents the part of mutual information of two random quantities that is not contained in a third one. By suitable choice of the latter, we can differentiate between direct and indirect interactions and derive an appropriate graphical model. An efficient estimator for partial mutual information is presented as well.
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                Author and article information

                Journal
                23004667
                10.1103/PhysRevLett.108.258701

                Chemistry
                Algorithms,Entropy,Models, Theoretical,Nonlinear Dynamics,Stochastic Processes
                Chemistry
                Algorithms, Entropy, Models, Theoretical, Nonlinear Dynamics, Stochastic Processes

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