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      Generic predictions of output probability based on complexities of inputs and outputs

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          Abstract

          For a broad class of input-output maps, arguments based on the coding theorem from algorithmic information theory (AIT) predict that simple (low Kolmogorov complexity) outputs are exponentially more likely to occur upon uniform random sampling of inputs than complex outputs are. Here, we derive probability bounds that are based on the complexities of the inputs as well as the outputs, rather than just on the complexities of the outputs. The more that outputs deviate from the coding theorem bound, the lower the complexity of their inputs. Since the number of low complexity inputs is limited, this behaviour leads to an effective lower bound on the probability. Our new bounds are tested for an RNA sequence to structure map, a finite state transducer and a perceptron. The success of these new methods opens avenues for AIT to be more widely used.

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          On the Complexity of Finite Sequences

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            Fast folding and comparison of RNA secondary structures

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              A formal theory of inductive inference. Part I

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                Author and article information

                Contributors
                ard.louis@physics.ox.ac.uk
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                10 March 2020
                10 March 2020
                2020
                : 10
                : 4415
                Affiliations
                [1 ]GRID grid.448933.1, Centre for Applied Mathematics and Bioinformatics, Department of Mathematics and Natural Sciences, , Gulf University for Science and Technology, ; Hawally, 32093 Kuwait
                [2 ]ISNI 0000 0004 1936 8948, GRID grid.4991.5, Rudolf Peierls Centre for Theoretical Physics, , University of Oxford, ; Parks Road, Oxford, OX1 3PU United Kingdom
                Article
                61135
                10.1038/s41598-020-61135-7
                7064605
                32157160
                0741e45f-3902-44e6-99f0-48d2d0cbb3fc
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 12 November 2019
                : 16 February 2020
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100003286, Kuwait Foundation for the Advancement of Sciences (KFAS);
                Award ID: P115-12SL-06
                Award Recipient :
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                © The Author(s) 2020

                Uncategorized
                information theory and computation,statistical physics
                Uncategorized
                information theory and computation, statistical physics

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