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      A Hypothesized Mechanism for Chronic Pancreatitis Caused by the N34S Mutation of Serine Protease Inhibitor Kazal-Type 1 Based on Conformational Studies

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          Abstract

          Purpose

          Although strongly related, the pathophysiological effect of the N34S mutation in the serine protease inhibitor Kazal type 1 (SPINK1) in chronic pancreatitis is still unknown. In this study, we investigate the conformational space of the human cationic trypsin-serine protease inhibitor complex.

          Methods

          Simulations with molecular dynamics, replica exchange, and transition pathway methods are used.

          Results

          Two main binding states of the inhibitor to the complex were found, which explicitly relate the influence of the mutation site to conformational changes in the active site of trypsin.

          Conclusion

          Based on our result, a hypothesis is formulated that explains the development of chronic pancreatitis through accelerated digestion of the mutant by trypsin.

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          Most cited references52

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          VMD: Visual molecular dynamics

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            GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

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              Comparison of simple potential functions for simulating liquid water

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                Author and article information

                Journal
                J Inflamm Res
                J Inflamm Res
                jir
                jinres
                Journal of Inflammation Research
                Dove
                1178-7031
                21 May 2021
                2021
                : 14
                : 2111-2119
                Affiliations
                [1 ]Institute of Biochemistry, University of Greifswald , Greifswald, Germany
                [2 ]Institute of Pharmacy, University of Greifswald , Greifswald, Germany
                [3 ]Department of Medicine II, Ludwig-Maximilian University of Munich , Munich, Germany
                [4 ]Department of Medicine a, University Medicine Greifswald , Greifswald, Germany
                Author notes
                Correspondence: Mihaela Delcea; Martin Kulke Institute of Biochemistry, University of Greifswald , Felix-Hausdorff-Straße 4, Greifswald, 17487, GermanyTel +49 3834 420 4423Fax +49 3834 420 4377 Email delceam@uni-greifswald.de; makulke@web.de
                Author information
                http://orcid.org/0000-0002-2689-2428
                http://orcid.org/0000-0003-3456-7075
                http://orcid.org/0000-0002-4614-3395
                http://orcid.org/0000-0001-9671-8882
                http://orcid.org/0000-0003-1262-6636
                http://orcid.org/0000-0002-0851-9072
                Article
                304787
                10.2147/JIR.S304787
                8157096
                34054303
                08f3ec28-f5d2-42c7-bfda-d6567f8a1337
                © 2021 Kulke et al.

                This work is published by Dove Medical Press Limited, and licensed under a Creative Commons Attribution License. The full terms of the License are available at http://creativecommons.org/licenses/by/4.0/. The license permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 01 February 2021
                : 24 March 2021
                Page count
                Figures: 3, Tables: 1, References: 52, Pages: 9
                Categories
                Hypothesis

                Immunology
                trypsin,molecular dynamics simulations,replica exchange,transition path sampling,umbrella sampling

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