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      Systematics and origin of moths in the subfamily Arctiinae (Lepidoptera, Erebidae) in the Neotropical region

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          An inexpensive, automation-friendly protocol for recovering high-quality DNA

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            High-Throughput Genomic Data in Systematics and Phylogenetics

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              Critical factors for assembling a high volume of DNA barcodes.

              Large-scale DNA barcoding projects are now moving toward activation while the creation of a comprehensive barcode library for eukaryotes will ultimately require the acquisition of some 100 million barcodes. To satisfy this need, analytical facilities must adopt protocols that can support the rapid, cost-effective assembly of barcodes. In this paper we discuss the prospects for establishing high volume DNA barcoding facilities by evaluating key steps in the analytical chain from specimens to barcodes. Alliances with members of the taxonomic community represent the most effective strategy for provisioning the analytical chain with specimens. The optimal protocols for DNA extraction and subsequent PCR amplification of the barcode region depend strongly on their condition, but production targets of 100K barcode records per year are now feasible for facilities working with compliant specimens. The analysis of museum collections is currently challenging, but PCR cocktails that combine polymerases with repair enzyme(s) promise future success. Barcode analysis is already a cost-effective option for species identification in some situations and this will increasingly be the case as reference libraries are assembled and analytical protocols are simplified.
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                Author and article information

                Journal
                Zoologica Scripta
                Zool Scr
                Wiley
                03003256
                May 2017
                May 2017
                July 27 2016
                : 46
                : 3
                : 348-362
                Affiliations
                [1 ]Departamento de Biologia Animal and Museu de Zoologia; Instituto de Biologia; Universidade Estadual de Campinas; C.P. 6109 Campinas 13083-970 Brazil
                [2 ]Department of Biology; Lunds Universitet; 223 62 Lund Sweden
                [3 ]Institute of Systematic Zoology and Evolutionary Biology with Phyletic Museum; Friedrich-Schiller-University Jena; 1 07743 Jena Germany
                [4 ]Instituto de Ciências da Educação, Programa de Licenciatura em Biologia; Universidade Federal do Oeste do Pará; 68040070 Santarém Pará Brazil
                [5 ]Institute of Systematics and Evolution of Animals; Polish Academy of Sciences; Poland Slawkowska 17 31-016 Krakow Poland
                [6 ]Departamento de Zoologia; Universidade Federal do Paraná; 81531-990 Curitiba Paraná Brazil
                [7 ]Universidade Estadual de Campinas; Departamento de Zoologia and Museu de História Natural; Instituto de Biologia P.O. Box 6109 13083970 Campinas Brazil
                Article
                10.1111/zsc.12202
                0a58dd20-800f-4bd1-87db-687e63b26c3d
                © 2016

                http://doi.wiley.com/10.1002/tdm_license_1

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