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      Detection of New Human Metabolic Urinary Markers in Chronic Alcoholism and Their Reversal by Aqueous Extract of Tinospora cordifolia Stem

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      Alcohol and Alcoholism
      Oxford University Press (OUP)

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          Analysis of metabolomic data using support vector machines.

          Metabolomics is an emerging field providing insight into physiological processes. It is an effective tool to investigate disease diagnosis or conduct toxicological studies by observing changes in metabolite concentrations in various biofluids. Multivariate statistical analysis is generally employed with nuclear magnetic resonance (NMR) or mass spectrometry (MS) data to determine differences between groups (for instance diseased vs healthy). Characteristic predictive models may be built based on a set of training data, and these models are subsequently used to predict whether new test data falls under a specific class. In this study, metabolomic data is obtained by doing a (1)H NMR spectroscopy on urine samples obtained from healthy subjects (male and female) and patients suffering from Streptococcus pneumoniae. We compare the performance of traditional PLS-DA multivariate analysis to support vector machines (SVMs), a technique widely used in genome studies on two case studies: (1) a case where nearly complete distinction may be seen (healthy versus pneumonia) and (2) a case where distinction is more ambiguous (male versus female). We show that SVMs are superior to PLS-DA in both cases in terms of predictive accuracy with the least number of features. With fewer number of features, SVMs are able to give better predictive model when compared to that of PLS-DA.
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            Alcohol Consumption and Risk of Stroke

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              Ethanol self-administration restores withdrawal-associated deficiencies in accumbal dopamine and 5-hydroxytryptamine release in dependent rats.

              Basal forebrain dopamine (DA) and 5-HT neurotransmission has been implicated in the mediation of the acute reinforcing actions of ethanol. Neuroadaptation theories predict that compensatory changes in neurochemical systems that are activated by alcohol acutely may underlie symptoms of withdrawal after chronic administration. To test this hypothesis, the release of DA and 5-HT was monitored by microdialysis in the nucleus accumbens of dependent male Wistar rats at the end of a 3-5 week ethanol (8.7% w/v) liquid diet regimen, during 8 hr of withdrawal, and during renewed availability of ethanol involving (1) the opportunity to operantly self-administer ethanol (10% w/v) for 60 min, followed by (2) unlimited access to the ethanol-liquid diet. Results were compared to control groups pair-fed with ethanol-free liquid diet and trained to self-administer either ethanol or water. In nondependent rats, operant ethanol self-administration increased both DA and 5-HT release in the NAC. Withdrawal from the chronic ethanol diet produced a progressive suppression in the release of these transmitters over the 8 hr withdrawal period. Self-administration of ethanol reinstated and maintained DA release at prewithdrawal levels but failed to completely restore 5-HT efflux. 5-HT levels recovered rapidly, however, within 1 hr of reexposure to ethanol liquid diet. These findings suggest that deficits in accumbal monoamine release may contribute to the negative affective consequences ethanol withdrawal and, thereby, motivate ethanol-seeking behavior in dependent subjects.
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                Author and article information

                Journal
                Alcohol and Alcoholism
                Oxford University Press (OUP)
                1464-3502
                0735-0414
                May 2015
                May 01 2015
                March 09 2015
                May 2015
                May 01 2015
                March 09 2015
                : 50
                : 3
                : 271-281
                Article
                10.1093/alcalc/agv012
                25754126
                0a9318fa-acea-4fb9-8f30-00ece44847fc
                © 2015
                History

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