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      Interpretable deep learning for automatic diagnosis of 12-lead electrocardiogram

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          Summary

          Electrocardiogram (ECG) is a widely used reliable, non-invasive approach for cardiovascular disease diagnosis. With the rapid growth of ECG examinations and the insufficiency of cardiologists, accurate and automatic diagnosis of ECG signals has become a hot research topic. In this paper, we developed a deep neural network for automatic classification of cardiac arrhythmias from 12-lead ECG recordings. Experiments on a public 12-lead ECG dataset showed the effectiveness of our method. The proposed model achieved an average F1 score of 0.813. The deep model showed superior performance than 4 machine learning methods learned from extracted expert features. Besides, the deep models trained on single-lead ECGs produce lower performance than using all 12 leads simultaneously. The best-performing leads are lead I, aVR, and V5 among 12 leads. Finally, we employed the SHapley Additive exPlanations method to interpret the model's behavior at both the patient level and population level.

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          Highlights

          • We develop a deep learning model for the automatic diagnosis of ECG

          • We present benchmark results of 12-lead ECG classification

          • We find out the top performance single lead in diagnosing ECGs

          • We employ the SHAP method to enhance clinical interpretability

          Abstract

          Medicine; Clinical Finding; Artificial Intelligence

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          Most cited references35

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          Deep learning.

          Deep learning allows computational models that are composed of multiple processing layers to learn representations of data with multiple levels of abstraction. These methods have dramatically improved the state-of-the-art in speech recognition, visual object recognition, object detection and many other domains such as drug discovery and genomics. Deep learning discovers intricate structure in large data sets by using the backpropagation algorithm to indicate how a machine should change its internal parameters that are used to compute the representation in each layer from the representation in the previous layer. Deep convolutional nets have brought about breakthroughs in processing images, video, speech and audio, whereas recurrent nets have shone light on sequential data such as text and speech.
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            Long Short-Term Memory

            Learning to store information over extended time intervals by recurrent backpropagation takes a very long time, mostly because of insufficient, decaying error backflow. We briefly review Hochreiter's (1991) analysis of this problem, then address it by introducing a novel, efficient, gradient-based method called long short-term memory (LSTM). Truncating the gradient where this does not do harm, LSTM can learn to bridge minimal time lags in excess of 1000 discrete-time steps by enforcing constant error flow through constant error carousels within special units. Multiplicative gate units learn to open and close access to the constant error flow. LSTM is local in space and time; its computational complexity per time step and weight is O(1). Our experiments with artificial data involve local, distributed, real-valued, and noisy pattern representations. In comparisons with real-time recurrent learning, back propagation through time, recurrent cascade correlation, Elman nets, and neural sequence chunking, LSTM leads to many more successful runs, and learns much faster. LSTM also solves complex, artificial long-time-lag tasks that have never been solved by previous recurrent network algorithms.
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              Heart Disease and Stroke Statistics—2020 Update

              Circulation

                Author and article information

                Contributors
                Journal
                iScience
                iScience
                iScience
                Elsevier
                2589-0042
                29 March 2021
                23 April 2021
                29 March 2021
                : 24
                : 4
                : 102373
                Affiliations
                [1 ]Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA
                [2 ]School of Computer Science and Technology, Wuhan University of Technology, Wuhan, Hubei, China
                [3 ]Department of Internal Medicine, Division of Hospital Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA
                [4 ]Department of Pediatrics, Division of Clinical Informatics, Nationwide Children's Hospital, Columbus, OH, USA
                [5 ]Department of Computer Science and Engineering, The Ohio State University, Columbus, OH, USA
                [6 ]Translational Data Analytics Institute, The Ohio State University, Columbus, OH, USA
                Author notes
                []Corresponding author zhang.10631@ 123456osu.edu
                [7]

                Lead contact

                Article
                S2589-0042(21)00341-2 102373
                10.1016/j.isci.2021.102373
                8082080
                33981967
                0bf0d5ef-f974-41f9-94d5-d8301420a542
                © 2021 The Author(s)

                This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 7 December 2020
                : 18 January 2021
                : 24 March 2021
                Categories
                Article

                medicine,clinical finding,artificial intelligence
                medicine, clinical finding, artificial intelligence

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