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      Exploration of Root-associated Bacteria from the Medicinal Plant Platycodon grandiflorum

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          Abstract

          The present study was performed to investigate root-associated bacteria from Platycodon grandiflorum, a medicinal plant commonly grown in East Asia. Isolates were obtained from the rhizosphere or root interior with various culture media, and phylogenetic analyses were performed based on their 16S rDNA sequences. In consideration of practical applications, traits related to plant growth promotion and niche adaptation were assessed in several endophytic strains with fewer biosafety concerns. The effects of a bacterial inoculation on seedling and mature plant growth were evaluated. Seventeen genera that encompassed more than 30 bacterial lineages were successfully retrieved from the roots, the majority of which have not been reported as P. grandiflorum-associated bacteria, particularly for non-negligible Proteobacteria. Although nitrogen-fixing or phosphate-solubilizing and indole acetic acid-producing activities were recorded in all of the strains selected, these strains were beneficial or detrimental to plant growth as evidenced by their influence on the length of seedlings and biomass of mature plants. Among the 4 endophytic Rhizobium species tested in the present study, the potentially novel Rhizobium sp. BF-E16, which was more compatible with the non-leguminous medicinal plant P. grandiflorum, was identified. Other than plant growth-promoting traits, characteristics such as plant constituent-hydrolyzing activities need to be taken into consideration and their roles clarified when investigating plant growth-promoting rhizobacteria.

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          Most cited references33

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          The water culture method of growing plants without soil

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            Plant Growth-Promoting Bacteria: Mechanisms and Applications

            The worldwide increases in both environmental damage and human population pressure have the unfortunate consequence that global food production may soon become insufficient to feed all of the world's people. It is therefore essential that agricultural productivity be significantly increased within the next few decades. To this end, agricultural practice is moving toward a more sustainable and environmentally friendly approach. This includes both the increasing use of transgenic plants and plant growth-promoting bacteria as a part of mainstream agricultural practice. Here, a number of the mechanisms utilized by plant growth-promoting bacteria are discussed and considered. It is envisioned that in the not too distant future, plant growth-promoting bacteria (PGPB) will begin to replace the use of chemicals in agriculture, horticulture, silviculture, and environmental cleanup strategies. While there may not be one simple strategy that can effectively promote the growth of all plants under all conditions, some of the strategies that are discussed already show great promise.
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              Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA.

              Using a set of synthetic oligonucleotides homologous to broadly conserved sequences in-vitro amplification via the polymerase chain reaction followed by direct sequencing results in almost complete nucleotide determination of a gene coding for 16S ribosomal RNA. As a model system the nucleotide sequence of the 16S rRNA gene of M.kansasii was determined and found to be 98.7% homologous to that of M.bovis BCG. This is the first report on a contiguous sequence information of an entire amplified gene spanning 1.5 kb without any subcloning procedures.
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                Author and article information

                Journal
                Microbes Environ
                Microbes Environ
                Microbes and Environments
                Japanese Society of Microbial Ecology (JSME)/Japanese Society of Soil Microbiology (JSSM)/Taiwan Society of Microbial Ecology (TSME)/Japanese Society of Plant Microbe Interactions (JSPMI)/Japanese Society for Extremophiles (JSE)
                1342-6311
                1347-4405
                December 2019
                27 December 2019
                : 34
                : 4
                : 413-420
                Affiliations
                [1 ] Department of Soil and Environmental Sciences, College of Agriculture and Natural Resources, National Chung Hsing University 40227 Taichung Taiwan, R.O.C
                [2 ] International Bachelor Program of Agribusiness (IBPA), College of Agriculture and Natural Resources, National Chung Hsing University 40227 Taichung Taiwan, R.O.C
                [3 ] Innovation and Development Center of Sustainable Agriculture (IDCSA), National Chung Hsing University 40227 Taichung Taiwan, R.O.C
                Author notes
                [* ]Corresponding author: E-mail: ftshen@ 123456dragon.nchu.edu.tw ; Tel: +886–4–22840373–4306; Fax: +886–4–22854250.
                Article
                34_413
                10.1264/jsme2.ME19030
                6934386
                31611488
                0ca1648c-7e54-44e0-9666-b0f06c0857b5
                Copyright © 2019 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles.

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 18 February 2019
                : 31 August 2019
                Categories
                Articles

                root-associated bacteria,platycodon grandiflorum,medicinal plant,plant growth promotion,plant constituent-hydrolyzing activities

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