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      Evaluation of model‐integrated evidence approaches for pharmacokinetic bioequivalence studies using model averaging methods

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          Abstract

          Conventional approaches for establishing bioequivalence (BE) between test and reference formulations using non‐compartmental analysis (NCA) may demonstrate low power in pharmacokinetic (PK) studies with sparse sampling. In this case, model‐integrated evidence (MIE) approaches for BE assessment have been shown to increase power, but may suffer from selection bias problems if models are built on the same data used for BE assessment. This work presents model averaging methods for BE evaluation and compares the power and type I error of these methods to conventional BE approaches for simulated studies of oral and ophthalmic formulations. Two model averaging methods were examined: bootstrap model selection and weight‐based model averaging with parameter uncertainty from three different sources, either from a sandwich covariance matrix, a bootstrap, or from sampling importance resampling (SIR). The proposed approaches increased power compared with conventional NCA‐based BE approaches, especially for the ophthalmic formulation scenarios, and were simultaneously able to adequately control type I error. In the rich sampling scenario considered for oral formulation, the weight‐based model averaging method with SIR uncertainty provided controlled type I error, that was closest to the target of 5%. In sparse‐sampling designs, especially the single sample ophthalmic scenarios, the type I error was best controlled by the bootstrap model selection method.

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          Modeling and Simulation Workbench for NONMEM: Tutorial on Pirana, PsN, and Xpose

          Several software tools are available that facilitate the use of the NONMEM software and extend its functionality. This tutorial shows how three commonly used and freely available tools, Pirana, PsN, and Xpose, form a tightly integrated workbench for modeling and simulation with NONMEM. During the tutorial, we provide some guidance on what diagnostics we consider most useful in pharmacokinetic model development and how to construct them using these tools.
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            An automated sampling importance resampling procedure for estimating parameter uncertainty

            Quantifying the uncertainty around endpoints used for decision-making in drug development is essential. In nonlinear mixed-effects models (NLMEM) analysis, this uncertainty is derived from the uncertainty around model parameters. Different methods to assess parameter uncertainty exist, but scrutiny towards their adequacy is low. In a previous publication, sampling importance resampling (SIR) was proposed as a fast and assumption-light method for the estimation of parameter uncertainty. A non-iterative implementation of SIR proved adequate for a set of simple NLMEM, but the choice of SIR settings remained an issue. This issue was alleviated in the present work through the development of an automated, iterative SIR procedure. The new procedure was tested on 25 real data examples covering a wide range of pharmacokinetic and pharmacodynamic NLMEM featuring continuous and categorical endpoints, with up to 39 estimated parameters and varying data richness. SIR led to appropriate results after 3 iterations on average. SIR was also compared with the covariance matrix, bootstrap and stochastic simulations and estimations (SSE). SIR was about 10 times faster than the bootstrap. SIR led to relative standard errors similar to the covariance matrix and SSE. SIR parameter 95% confidence intervals also displayed similar asymmetry to SSE. In conclusion, the automated SIR procedure was successfully applied over a large variety of cases, and its user-friendly implementation in the PsN program enables an efficient estimation of parameter uncertainty in NLMEM. Electronic supplementary material The online version of this article (doi:10.1007/s10928-017-9542-0) contains supplementary material, which is available to authorized users.
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              A diagnostic tool for population models using non-compartmental analysis: The ncappc package for R

              Non-compartmental analysis (NCA) calculates pharmacokinetic (PK) metrics related to the systemic exposure to a drug following administration, e.g. area under the concentration-time curve and peak concentration. We developed a new package in R, called ncappc, to perform (i) a NCA and (ii) simulation-based posterior predictive checks (ppc) for a population PK (PopPK) model using NCA metrics.

                Author and article information

                Contributors
                andrew.hooker@farmaci.uu.se
                Journal
                CPT Pharmacometrics Syst Pharmacol
                CPT Pharmacometrics Syst Pharmacol
                10.1002/(ISSN)2163-8306
                PSP4
                CPT: Pharmacometrics & Systems Pharmacology
                John Wiley and Sons Inc. (Hoboken )
                2163-8306
                28 August 2024
                October 2024
                : 13
                : 10 ( doiID: 10.1002/psp4.v13.10 )
                : 1748-1761
                Affiliations
                [ 1 ] Department of Pharmacy Uppsala University Uppsala Sweden
                [ 2 ] Division of Quantitative Methods and Modelling Office of Research and Standards, Office of Generic Drugs, Food and Drug Administration Silver Spring Maryland USA
                Author notes
                [*] [* ] Correspondence

                Andrew C. Hooker, Department of Pharmacy, Uppsala University, Uppsala, Sweden.

                Email: andrew.hooker@ 123456farmaci.uu.se

                Author information
                https://orcid.org/0000-0003-2249-7911
                https://orcid.org/0009-0002-0663-0532
                https://orcid.org/0000-0001-7537-9615
                https://orcid.org/0000-0001-5378-2948
                https://orcid.org/0000-0002-0257-9082
                https://orcid.org/0000-0003-1258-8297
                https://orcid.org/0000-0002-2676-5912
                Article
                PSP413217 PSP-2023-0258
                10.1002/psp4.13217
                11494900
                39205490
                0f2a2986-c665-4808-ae2a-5202bb479979
                © 2024 The Author(s). CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 26 June 2024
                : 18 December 2023
                : 19 July 2024
                Page count
                Figures: 5, Tables: 2, Pages: 14, Words: 7200
                Categories
                Article
                Research
                Article
                Custom metadata
                2.0
                October 2024
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.4.9 mode:remove_FC converted:22.10.2024

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