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      Synthesis, Characterization, DNA Binding, Anticancer, and Molecular Docking Studies of Novel Imidazolium-Based Ionic Liquids with Fluorinated Phenylacetamide Tethers

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          Abstract

          Newer imidazolium ionic liquid (IL) halides 4a–f appending variety of fluorinated phenylacetamide side chains were designed and synthesized through quaternization of 1-methyl and/or 1,2-dimethylimidazole with appropriate 2-chloro- N-(fluorinatedphenyl)acetamides. The resulting ILs were converted to their respective ionic liquid analogues carrying fluorinated counteranions (PF 6 , BF 4 , and/or CF 3COO ) 5a–r. All newly synthesized ILs were fully characterized using several spectroscopic experiments such as 1H, 13C, 11B, 19F, 31P NMR, and mass analysis. The synthesized ionic liquids were investigated for their DNA binding and anticancer activities. The obtained DNA binding constants ranged from 1.444 × 10 5 to 3.518 × 10 5, indicating a reasonably good binding affinity. The percentage of anticancer activities ranged from 48 to 59 with H-1229 cell line, showing quite good anticancer potential. The modeling studies indicated the interactions of the reported molecules with DNA via hydrogen bonds. These were in agreement with those of DNA binding and anticancer results. Briefly, the designed ionic liquids may be used as good anticancer candidates for treating human cancer.

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          A semiempirical free energy force field with charge-based desolvation.

          The authors describe the development and testing of a semiempirical free energy force field for use in AutoDock4 and similar grid-based docking methods. The force field is based on a comprehensive thermodynamic model that allows incorporation of intramolecular energies into the predicted free energy of binding. It also incorporates a charge-based method for evaluation of desolvation designed to use a typical set of atom types. The method has been calibrated on a set of 188 diverse protein-ligand complexes of known structure and binding energy, and tested on a set of 100 complexes of ligands with retroviral proteases. The force field shows improvement in redocking simulations over the previous AutoDock3 force field.
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            Biological Activity of Ionic Liquids and Their Application in Pharmaceutics and Medicine

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              Recognition and reaction of metallointercalators with DNA.

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                Author and article information

                Journal
                ACS Omega
                ACS Omega
                ao
                acsodf
                ACS Omega
                American Chemical Society
                2470-1343
                09 March 2020
                17 March 2020
                : 5
                : 10
                : 4807-4815
                Affiliations
                []Department of Chemistry, Faculty of Science, Taibah University , Al-Madinah Al-Munawarah 30002, Saudi Arabia
                []Department of Chemistry, Faculty of Sciences, University of Sciences and Technology Mohamed Boudiaf, Laboratoire de Chimie and Electrochimie des Complexes Metalliques (LCECM) USTO-MB , P.O. Box 1505, El M‘nouar, Oran 31000, Algeria
                [§ ]Department of Chemistry, Jamia Millia Islamia (A Central University) , New Delhi 110025, India
                Author notes
                [* ]Email: nadjetrezki@ 123456yahoo.fr . Phone: +966537268682.
                [* ]Email: mr_aouad@ 123456yahoo.fr . Phone: +966540953537.
                Article
                10.1021/acsomega.9b03468
                7081306
                32201766
                10dc2171-7647-4699-a155-68eb12802cc6
                Copyright © 2020 American Chemical Society

                This is an open access article published under an ACS AuthorChoice License, which permits copying and redistribution of the article or any adaptations for non-commercial purposes.

                History
                : 17 October 2019
                : 28 February 2020
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                ao9b03468

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