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      Taxon cycle predictions supported by model-based inference in Indo-Pacific trap-jaw ants (Hymenoptera: Formicidae:Odontomachus)

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          Model selection in historical biogeography reveals that founder-event speciation is a crucial process in Island Clades.

          Founder-event speciation, where a rare jump dispersal event founds a new genetically isolated lineage, has long been considered crucial by many historical biogeographers, but its importance is disputed within the vicariance school. Probabilistic modeling of geographic range evolution creates the potential to test different biogeographical models against data using standard statistical model choice procedures, as long as multiple models are available. I re-implement the Dispersal-Extinction-Cladogenesis (DEC) model of LAGRANGE in the R package BioGeoBEARS, and modify it to create a new model, DEC + J, which adds founder-event speciation, the importance of which is governed by a new free parameter, [Formula: see text]. The identifiability of DEC and DEC + J is tested on data sets simulated under a wide range of macroevolutionary models where geography evolves jointly with lineage birth/death events. The results confirm that DEC and DEC + J are identifiable even though these models ignore the fact that molecular phylogenies are missing many cladogenesis and extinction events. The simulations also indicate that DEC will have substantially increased errors in ancestral range estimation and parameter inference when the true model includes + J. DEC and DEC + J are compared on 13 empirical data sets drawn from studies of island clades. Likelihood-ratio tests indicate that all clades reject DEC, and AICc model weights show large to overwhelming support for DEC + J, for the first time verifying the importance of founder-event speciation in island clades via statistical model choice. Under DEC + J, ancestral nodes are usually estimated to have ranges occupying only one island, rather than the widespread ancestors often favored by DEC. These results indicate that the assumptions of historical biogeography models can have large impacts on inference and require testing and comparison with statistical methods. © The Author(s) 2014. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.
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            Dispersal-Vicariance Analysis: A New Approach to the Quantification of Historical Biogeography

            F Ronquist (1997)
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              The Parsimony Ratchet, a New Method for Rapid Parsimony Analysis

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                Author and article information

                Journal
                Molecular Ecology
                Mol Ecol
                Wiley
                09621083
                October 2018
                October 2018
                September 22 2018
                : 27
                : 20
                : 4090-4107
                Affiliations
                [1 ]Institute of Entomology; Biology Centre CAS; Ceske Budejovice Czech Republic
                [2 ]Department of Zoology; Faculty of Science; University of South Bohemia; Ceske Budejovice Czech Republic
                [3 ]Department of Biological and Environmental Sciences; University of Gothenburg; Göteborg Sweden
                [4 ]Gothenburg Global Biodiversity Centre; Göteborg Sweden
                [5 ]Division of Ecology and Evolution; Research School of Biology; The Australian National University; Canberra Australian Capital Territory Australia
                [6 ]School of Biological Sciences; The University of Auckland; Auckland New Zealand
                [7 ]Department of Entomology; National Museum of Natural History; Smithsonian Institution; Washington District of Columbia
                [8 ]Department of Entomology and Department of Animal Biology; University of Illinois, Urbana-Champaign; Urbana Illinois
                [9 ]Division of Invertebrate Zoology; American Museum of Natural History; New York City New York
                [10 ]Department of Applied Ecology; North Carolina State University; Raleigh North Carolina
                [11 ]W.M. Keck Center for Behavioral Biology; North Carolina State University; Raleigh North Carolina
                [12 ]Research & Collections; North Carolina Museum of Natural Sciences; Raleigh North Carolina
                [13 ]Laboratorio Nacional de Análisis y Síntesis Ecológica; ENES, UNAM; Morelia Mexico
                Article
                10.1111/mec.14835
                11db8e3f-79d8-4155-b7a5-dfe62c678a3d
                © 2018

                http://doi.wiley.com/10.1002/tdm_license_1.1

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