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      A group of ectomycorrhizal fungi restricts organic matter accumulation in boreal forest

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          Search and clustering orders of magnitude faster than BLAST.

           Robert Edgar (2010)
          Biological sequence data is accumulating rapidly, motivating the development of improved high-throughput methods for sequence classification. UBLAST and USEARCH are new algorithms enabling sensitive local and global search of large sequence databases at exceptionally high speeds. They are often orders of magnitude faster than BLAST in practical applications, though sensitivity to distant protein relationships is lower. UCLUST is a new clustering method that exploits USEARCH to assign sequences to clusters. UCLUST offers several advantages over the widely used program CD-HIT, including higher speed, lower memory use, improved sensitivity, clustering at lower identities and classification of much larger datasets. Binaries are available at no charge for non-commercial use at http://www.drive5.com/usearch.
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            Mycorrhizas and nutrient cycling in ecosystems - a journey towards relevance?

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              Microbial diversity and soil functions

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                Author and article information

                Contributors
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                Journal
                Ecology Letters
                Ecol Lett
                Wiley
                1461-023X
                1461-0248
                July 2021
                May 02 2021
                July 2021
                : 24
                : 7
                : 1341-1351
                Affiliations
                [1 ]Department of Soil and Environment Swedish University of Agricultural Sciences Uppsala Sweden
                [2 ]Department of Forest Mycology and Plant Pathology Swedish University of Agricultural Sciences Uppsala Sweden
                Article
                10.1111/ele.13746
                © 2021

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