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      Taxonomic Study on the Lichen Genus Xanthoparmelia (Ascomycotina, Parmeliaceae) in Korea

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          Abstract

          In previous studies investigating the genus Xanthoparmelia, thirteen different species have been reported from South Korea alone. However, there currently has been no revisional study performed until now. To explore the genus Xanthoparmelia, a phenotypic analysis was performed based on morphological, anatomical and chemical characters, while an investigation of Xanthoparmelia phylogeny was based on nuclear ribosomal (nr) DNA ITS sequences. A thorough examination of the specimens deposited in the Korean Lichen Research Institute (KoLRI) confirmed that eight species of Xanthoparmelia occur inside South Korea. Our analysis further confirmed the colors of the lower surface and medullar chemistry are important taxonomic characters in Xanthoparmelia. This study also presents a detailed description of each species and a key to the genus.

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          Most cited references25

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          MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

          S. KUMAR (2004)
          With its theoretical basis firmly established in molecular evolutionary and population genetics, the comparative DNA and protein sequence analysis plays a central role in reconstructing the evolutionary histories of species and multigene families, estimating rates of molecular evolution, and inferring the nature and extent of selective forces shaping the evolution of genes and genomes. The scope of these investigations has now expanded greatly owing to the development of high-throughput sequencing techniques and novel statistical and computational methods. These methods require easy-to-use computer programs. One such effort has been to produce Molecular Evolutionary Genetics Analysis (MEGA) software, with its focus on facilitating the exploration and analysis of the DNA and protein sequence variation from an evolutionary perspective. Currently in its third major release, MEGA3 contains facilities for automatic and manual sequence alignment, web-based mining of databases, inference of the phylogenetic trees, estimation of evolutionary distances and testing evolutionary hypotheses. This paper provides an overview of the statistical methods, computational tools, and visual exploration modules for data input and the results obtainable in MEGA.
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            Improved conditions and new data for the identification of lichen products by a standardized thin-layer chromatographic method.

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              Lichen of North America

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                Author and article information

                Journal
                Mycobiology
                Mycobiology
                MB
                Mycobiology
                The Korean Society of Mycology
                1229-8093
                2092-9323
                December 2008
                31 December 2008
                : 36
                : 4
                : 203-210
                Affiliations
                Korean Lichen Research Institute, Sunchon National University, Sunchon 540-742, Korea.
                Author notes
                Corresponding author ( jshur1@ 123456sunchon.ac.kr )
                Article
                10.4489/MYCO.2008.36.4.203
                3755196
                23997627
                1f740b41-34ff-41d9-9aab-f8641b94d2c0
                Copyright © 2008 The Korean Society of Mycology

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 17 November 2008
                : 13 December 2008
                Categories
                Research Article

                Plant science & Botany
                phylogenetic analysis,phenotypic analysis,lichen,its sequences,xanthoparmelia

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