Introduction Amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD) are two common neurodegenerative diseases [1], [2]. ALS is characterized by degeneration of motor neurons, denervation atrophy of skeletal muscles, and progressive paralysis of limbs [3], [4]. FTLD mainly affects cortical neurons and causes cortical dementia [5]. ALS patients may develop cortical dementia that overlaps with FTLD in pathology [2], [6]. ALS and FTLD share a common feature of pathology—ubiquitin-positive inclusion [7]–[10]. Although selective groups of neurons are primarily affected in each disease condition [2], increasing evidence suggests that ALS and FTLD may fall the same disease spectrum. Fused in Sarcoma (FUS) has recently been linked to both ALS and FTLD [11], [12]. FUS is a highly conserved ribonucleoprotein that mainly resides in the nucleus while shuttling between the cytoplasm and the nucleus [13]–[15]. Fus was initially reported to translocate and fuse with one of several genes to form chimeric oncogenes in leukemia and liposarcoma [16], [17]. The N-terminus of the FUS protein is rich in glutamine, serine, and tyrosine residues, and may be responsible for transactivation activity of FUS oncogenic fusion [18], [19]. The C-terminal part of the FUS protein contains several structural motifs important for nucleic acid binding [18], [20], [21]. FUS may also play an important role in regulating mRNA [14], [22], [23]. Deletion of the fus gene results in chromosomal instability and perinatal death in inbred mice [24], but causes only male sterility in outbred mice [25]. FUS-positive inclusion is considered a hallmark of some sporadic FTLD [9], [26]. FUS, Tau, and TDP-43 are the important components of ubiquitinated proteins in FTLD, but exclude one another in ubiquitin-positive inclusion [8]–[10], [27]. Mutations in the fus gene segregate with ALS and FTLD [11], [12], [28], [29], implying a pathogenic role of FUS in these diseases. Given the importance of FUS in human diseases, the consequences of mutation in the fus gene must be examined. Here we show that overexpression of a mutant, but not normal, human FUS in rats induced progressive paralysis resembling ALS. Mutant FUS transgenic rats developed severe axonopathy of motor neurons, denervation atrophy of skeletal muscles, and a substantial loss of cortical and hippocampal neurons. At advanced ages, normal FUS transgenic rats displayed deficits in spatial learning and memory, and a loss of cortical and hippocampal neurons. Neuronal loss was accompanied by ubiquitin aggregation and glial reaction. Our FUS transgenic rats recapitulated some features of ALS and FTLD. Results Overexpression of a mutant, but not normal, human fus gene causes progressive paralysis in transgenic rats To study the consequences of mutation in the fus gene, we created transgenic rats expressing the human fus gene with or without mutation (Table S1). Most mutations in the fus gene are a single amino acid alteration, as exemplified by the substitution of arginine for cysteine at residue 521 (R521C) that is identified in geographically unrelated patients [11], [12], [30]. We therefore chose R521C as an example of fus mutation for our transgenic studies. The ribonucleoproteins FUS and TDP-43 are both linked to ALS and FTLD [11], . FUS and TDP-43 are robustly and ubiquitously expressed in rodents during development [33], implying an important role for these genes in development. Constitutive expression of a mutant TDP-43 causes early death to transgenic founder rats [34], preventing transgenic lines from establishment. To overcome this potential difficulty, we used a tetracycline-inducible system to express human fus transgenes in a controlled manner [34]. From 26 transgenic founders carrying the normal (12 rats) or the mutant (14 rats) fus transgene, we established four transgenic lines (line number corresponding to copy number of the transgenes) that expressed human FUS, under tight control by Doxycycline (Dox), at substantial levels (Figure 1A, Figure S1, and Table S1). FUS transgenic rats were crossed with a CAG-tTA transgenic line to produce double transgenic offspring that expressed human FUS transgene in the absence of Dox [35]. Breeding female rats were given Dox in their drinking water until delivery such that expression of the fus transgenes would be recovered in the offspring after Dox withdrawal (Figures S1 and S2). 10.1371/journal.pgen.1002011.g001 Figure 1 Progressive paralysis in transgenic rats overexpressing a mutant human FUS. (A) Immunoblotting showed expression of human FUS in normal (WT) and mutant (R521) fus transgenic rats, but not in nontransgenic controls (NT). Each lane was loaded with 30 µg of total protein in the lysates of spinal cord. The blotting membrane was probed with an antibody to human FUS (made in-house) and then with an antibody against GAPDH after stripping. The number of transgenic lines corresponds to the number of FUS transgene copies. * indicates a non-specific band. (B–F) Immunohistochemistry detected expression of human FUS in the cortex (B) and spinal cord (D, E) of FUS transgenic rats (line 16), but not in tissues of nontransgenic littermates (C, cortex; F, spinal cord). Expression of human FUS in lumbar spinal cord profiled at a low magnification (D). Human FUS was diffusely located in the cytoplasm of motor neurons in the ventral horn (E). Scale bars: B–C and E–F: 20 µm; D, 100 µm. (G, H) Representative photographs of male transgenic rats of line 22 (G, 30 days of age) and line 16 (H, 60 days of age) at paralysis stages. (I, J) Graphs show the probability of disease onset (I) and survival (J) in FUS transgenic rats. Disease onset was defined as an unrecoverable reduction in the grip strength of fore or hind paws. Rats were euthanized and counted as dead when two or more legs were paralyzed or body weight was reduced by 30%. All FUS transgenic rats carried the CAG-tTA transgene. Breeding female rats were given Dox in their drinking water (50 µg/ml) until delivery. Each group contained 13 to 16 rats. Immunoreactivity to human FUS was detected in the brain and spinal cord (gray and white matter) of FUS transgenic rats (Figure 1B, 1D, and 1E), but not in tissues of nontransgenic rats (Figure 1C and 1F). While transgenic rats of lines 16, 20, and 22 expressed human FUS at comparable levels (Figure 1A), only the mutant FUS transgenic rats (lines 16 and 22) developed paralysis resembling ALS (Figure 1G-1J and Videos S1 and S2). Similar disease phenotypes were observed in two independent lines of mutant FUS transgenic rats (Figure 1G–1J), suggesting that the disease phenotypes resulted from expression of the mutant fus gene. Axonopathy of the motor neurons contributes to paralysis in mutant FUS transgenic rats Pathological analysis revealed that few motor neurons in the spinal cord were undergoing degeneration (Figure 2A–2E). Degenerating axons were detected in the dorsal corticospinal tracts (Figure 2G), the ventral roots (Figure 2I and 2M), and the dorsal roots (Figure 2K) of mutant FUS transgenic rats at paralysis stages. As a result of motor axon degeneration, groups of skeletal muscle cells were atrophied (Figure 2O), although there were some perimysial cells with small nuclei suggestive of inflammation. These pathological changes were not observed in nontransgenic rats (Figure 2A) and also not observed in age-matched, wild-type FUS transgenic rats (Figure 2B, 2D, 2F, 2H, 2J, 2L, and 2N) expressing human FUS at comparable levels (Figure 1A). Collectively, these findings suggest that mutation of the fus gene is pathogenic. Electromyography of the gastrocnemius muscle revealed fibrillation potential, a characteristic of denervation atrophy (Figure 2P). Confocal microscopy showed that a substantial number of neuromuscular junctions were denervated in paralyzed FUS transgenic rats (Figure 2Q and 2R). Through stereological cell counting, we estimated the number of spinal motor neurons and did not detect a significant loss of motor neurons, although a trend of neuron loss was observed in the mutant FUS rats at paralysis stages (Figure 2S). Our results suggest that degeneration of motor axons contributed to paralysis in the mutant FUS transgenic rats. 10.1371/journal.pgen.1002011.g002 Figure 2 Motor neuron degeneration accompanied by denervation atrophy of skeletal muscle. (A–C) Cresyl violet staining of motor neurons in the L3 ventral horn of mutant FUS transgenic (C, line 16), age-matched nontransgenic (A), and normal FUS transgenic (B, line 20) rats. (D, E) Bielschowsky silver staining detected degenerating neurons (arrows) in the spinal cord of mutant FUS transgenic rats at paralysis stages (E, line 16), but not in that of age-matched normal FUS transgenic rats (D, line 20). Note that degenerating neurons were rare in the mutant FUS transgenic rats even at paralysis stages. (F–K) Toluidine blue staining of axons of the dorsal corticospinal tract (F, G), L3 ventral roots (H, I), and L3 dorsal roots (J, K). Degenerating axons were seen in paralyzed mutant FUS transgenic rats of line 16 (G, I, K), but not in age-matched normal FUS transgenic rats of line 20 (F, G, J). (L, M) Electron microscopy of the motor axons in the L3 ventral roots of paralyzed mutant FUS (M, line 16) and age-matched normal FUS transgenic rats (L, line 20). Arrows point to degenerating axons. (N, O) H&E staining showed group atrophy (arrows) of the gastrocnemius muscle in paralyzed mutant FUS (O), but not in age-matched normal FUS (N) transgenic rats. (P) Electromyography of gastrocnemius muscles revealed fibrillation (arrows) and fasciculation (arrow head) potentials in a mutant FUS transgenic rat (R521C), but not in its nontransgenic littermate (NT). (Q) Confocal microscopy of the focal structures of neuromuscular junctions (NMJ) in gastrocnemius muscles. Compared to the NMJ of a nontransgenic littermate (NT), the NMJ of a mutant FUS transgenic rat (R521C) was denervated. While axon terminals were visualized by immunostaining for synaptophysin (SYN) and neurofilament (NF), postsynaptic nicotinic receptors were visualized with Alexa fluor 555-conjugated α-bungarotoxin (α-BTX). (R) Quantification of NMJ revealed a reduction of intact NMJ in the mutant FUS (lines 16 and 22), but not in the normal FUS (line 20), transgenic rats. Twenty NMJs were examined for each animal (5-6 rats per genotype). *p 25 µm in diameter) in the ventral horn of L3 spinal segments taken from nontransgenic (NT) or transgenic (TG) rats. Data are presented as means ± SD (n = 9–11). Scale bars: A–E, 50 µm; F–K, 20 µm; L, M, 5 µm; N, O, 30 µm. Overexpression of mutant human FUS causes a substantial loss of neurons in the brains of FUS transgenic rats ALS and FTLD somewhat overlap in pathology [2], and mutation of the fus gene is linked to both ALS and FTLD [28], [29]. We therefore examined the pathology in the brains of mutant FUS transgenic rats. Through stereological cell counting (Figure S3), we detected a significant loss of neurons in the frontal cortex and dentate gyrus of mutant FUS transgenic rats at paralysis stages (Figure 3). This neuronal loss was not observed in age-matched, normal FUS transgenic rats of line 20, although they expressed human FUS at comparable levels (Figure 1A and Figure 3). While cortical neurons are the primary targets of degeneration in FTLD, hippocampal neurons could be affected particularly at advanced disease stages [36], [37]. Our results show that overexpression of mutant FUS induced a substantial loss of cortical and hippocampal neurons in FUS transgenic rats, a phenotype of FTLD in rat models. 10.1371/journal.pgen.1002011.g003 Figure 3 Loss of neurons in the cortex and hippocampus of mutant FUS transgenic rats. (A–C) Cresyl violet staining of hippocampus (A–B and E–F) and cortex (C–D and G–H) showed faint staining in the tissues of mutant FUS transgenic rats at disease end-stages (B, D, F, and H) compared to age-matched nontransgenic rats (A, C, E, and G). Scale bars: A–B, 400 µm; C–D, 50 µm; and E–H, 20 µm. (I, J) Stereological cell counting revealed a loss of neurons in the cortex (I) and dentate gyrus (J) of mutant FUS transgenic rats (lines 16 and 20). The CAG-tTA single transgenic rats and nontransgenic rats were combined as control rats (NT) because no difference was observed between these rats. Mutant FUS transgenic rats were killed at disease end-stages and paired control rats were killed at matched ages. Normal FUS transgenic rats and their paired controls were killed at 70 days of age, by which time mutant FUS transgenic rats had reached disease end-stages. Data are presented as means ± SD (n = 5–7). *p<0.05. Overexpression of normal FUS is sufficient to induce neurodegeneration in transgenic rats FUS proteinopathy is a hallmark of some sporadic FTLD cases [9], [26]. How normal FUS is related to neurodegeneration in the disease remains to be examined. Our wild-type (line 20) and mutant (line 16) FUS transgenic rats expressed human FUS at comparable levels (Figure 1A), but only the mutant FUS transgenic rats developed paralysis at an early age (Figure 1G–1I). We further examined the normal FUS transgenic rats at advanced ages (Figure 4). Although the normal FUS transgenic rats were asymptomatic by the age of 1 year, they displayed a deficit in spatial learning and memory at the advanced age (Figure 4J and 4K). By stereological cell counting, we detected a moderate, but significant, loss of neurons in the frontal cortex and dentate gyrus of the normal FUS transgenic rats at advanced ages (Figure 4L and 4M). These findings suggest that increased expression of normal FUS is sufficient to induce neurodegeneration and that mutant FUS is more toxic to neurons than is normal FUS. 10.1371/journal.pgen.1002011.g004 Figure 4 Neuron loss accompanied by ubiquitin aggregation in aged rats overexpressing the normal human fus gene. (A–C) Double-fluorescence staining for human FUS (A, red) and the neuronal marker NeuN (B, green) in the frontal cortex of normal human FUS transgenic rats (line 20). Most FUS-positive cells expressed NeuN, but some did not (C). (D–I) Immunofluorescence staining revealed ubiquitin aggregation in aged (G–I; 1 year of age), but not young (D–F; 3 months of age), normal FUS transgenic rats. Coronal sections of frontal cortex were immunostained with antibodies to ubiquitin (D, G: green) and human FUS (E, H: red). Scale bars: A–C, 100 µm; D–I, 20 µm. (J, K) Barnes maze analysis revealed spatial learning deficits in normal FUS transgenic rats of line 20 at advanced ages. One year old transgenic rats (TG) and their nontransgenic littermates (NT) were tested in a Barnes maze and time spent to locate the fixed escape hole (latency) and the number of errors made before escaping were recorded. (L, M) Stereological cell counting revealed a loss of neurons in the cortex (J) and dentate gyrus (K) of normal FUS transgenic rats at advanced ages (line 20). Coronal sections of one hemisphere were stained with Cresyl violet and the number of neurons in the frontal cortex and dentate gyrus was estimated by stereological cell counting. Normal FUS transgenic rats and their nontransgenic controls were killed at the age of 1 year. Data are presented as means ± SD (n = 5). * p<0.05. Neuron death is accompanied by ubiquitin aggregation and glial reaction Ubiquitin-positive inclusion is a hallmark of ALS and FTLD [8]–[27]. Accumulated ubiquitin was detected in the cortex (Figure 5D–5F) and spinal cord (Figure 5J–5L) of mutant FUS transgenic rats at paralysis stages, but was not detected in the tissues of age-matched normal FUS transgenic rats (Figure 5A–5C and 5G–5I). In the normal FUS transgenic rats, ubiquitin aggregates were observed only when neuronal loss was detected at advanced ages (Figure 4), suggesting that ubiquitin aggregation accompanied neurodegeneration. Ubiquitin inclusions were detected only in FUS-expressing cells, but were not colocalized with FUS (Figure 4G–4I and Figure 5). Ubiquitinated aggregates were positive for the mitochondrial marker COXIV (Figure S4), suggesting that damaged mitochondria may be ubiquitinated for degradation. No typical FUS inclusion was detected in FUS transgenic rats (Figure 1B and 1E, and Figure 5). FUS mainly resided in the nucleus, but was also diffusely located in the cytoplasm (Figure 1E). The C-terminus of FUS contains a nuclear localization signal that is necessary for the nuclear import of FUS. Most mutations occur within the C-terminus of FUS and disrupt this nuclear localization signal [38], leading to cytoplasmic accumulation of FUS. The R521C mutation tested in our transgenic studies affects FUS distribution to a minimal extent [38], and may be less potent in eliciting redistribution and aggregation of FUS in transgenic rats. Glial cells are key players in neurodegeneration [39]. Here we found that astrocytes and microglia proliferated in the brain (Figure 6A–6F) and spinal cord (Figure 6H–6K) of FUS transgenic rats at paralysis stages. Our results indicate that neurodegeneration was accompanied by ubiquitin aggregation and glial reaction. 10.1371/journal.pgen.1002011.g005 Figure 5 Accumulation of ubiquitin in mutant FUS transgenic rats. (A–L) Double-fluorescence staining revealed accumulation of ubiquitin in the cortex (D–F) and spinal cord (J–L) of the mutant FUS transgenic rats (line 16) at paralysis stages, but not in tissues of the age-matched normal FUS transgenic rats (line 20) (A–C: cortex; G–I: spinal cord). Coronal sections of the frontal cortex and traverse sections of the lumbar cord were immunostained with antibodies to ubiquitin (green) and human FUS (red). Scale bars: A–F, 20 µm. 10.1371/journal.pgen.1002011.g006 Figure 6 Proliferation of astrocytes and microglia in mutant FUS transgenic rats. (A–K) Immunofluorescence staining for the microglia marker Iba-1 (A–F) and the astrocyte marker GFAP (H–K) in the mutant FUS transgenic rats of line 16 at the paralysis stage (R521C) and in their nontransgenic age-matched littermates (NT). Coronal sections of the frontal cortex and traverse sections of the lumbar spinal cord were immunostained with antibodies to Iba-1 (red) or GFAP (green). Scale bars: 100 µm. Discussion ALS and FTLD are two related neurodegenerative diseases [2], [6] and may fall within the same disease spectrum. While a subset of FTLD patients develop motor neuron disease [40], ALS patients may develop the symptoms and pathology of FTLD [41]–[43]. FUS and TDP-43 are two ribonucleoproteins and their mutant forms are linked to both ALS and FTLD [7]–[29]. We obtained two FUS transgenic lines expressing a mutant or normal human fus transgene at comparable levels. Transgenic rats expressing a mutant FUS developed progressive paralysis secondary to axonal degeneration and displayed a substantial loss of neurons in the cortex and hippocampus, reproducing some phenotypes of ALS and FTLD. While the mutant FUS transgenic rats developed some phenotypes of ALS and FTLD, the age-matched normal FUS transgenic rats were asymptomatic. Our findings in FUS transgenic rats confirm that mutation of the fus gene is related to these two diseases and suggest that mutation of the fus gene is pathogenic. FUS proteinopathy characterizes a subset of sporadic FTLD, in which ubiquitin-positive inclusions are negative for TDP-43 and tau but positive for FUS protein [27], [44]. However, it is not known how normal FUS is related to neurodegeneration in these diseases. While overexpression of mutant FUS induced severe phenotypes in young animals, overexpression of the normal FUS also induced neuron death as well as learning and memory deficits in aged rats. Mutated FUS appeared more toxic in transgenic rats, but an increase in the expression or function of the fus gene may elicit neurotoxicity. The effects of gene mutation include gain-of-function, loss-of-function, and dominant-negative effects. Overexpression of either the mutant or wild-type FUS induced disease phenotypes in transgenic rats, suggesting that mutation of the fus gene may cause the disease by a gain of toxic properties. Since gain-of-function and dominant-negative mutations can induce similar effects in transgenic models, more sophisticated genetic approaches, such as gene knockin, may be required for determining the nature of FUS mutations. FUS and TDP-43 show a similarity in disease induction. Mutant forms of these genes are more toxic than the normal genes [34], and increased expression of the normal genes is sufficient to induce neurodegeneration [45], [46]. Both FUS and TDP-43 are ribonucleoproteins and may have overlapping functions. Indeed, FUS and TDP-43 are found in one protein complex regulating HDAC6 mRNA [47]. Like TDP-43, FUS predominantly resides in the nucleus, but also shuttles between the nucleus and the cytoplasm to perform multiple functions [13]. Similar to results for TDP-43 [34], we found that FUS was diffusely located in the cytoplasm in transgenic rats. Possibly, redistribution of FUS may alter the functions of this multifunctional protein, incurring cellular toxicity. In summary, our results suggest that mutant FUS is more toxic to neurons than normal FUS and that increased expression of normal FUS is sufficient to induce neuron death. Our FUS transgenic rats reproduced some phenotypes of ALS and FTLD. The establishment of these FUS transgenic rat lines will allow for more detailed studies of FUS-related diseases. Material and Methods Ethics statement Animal use followed NIH guidelines. The animal use protocol was approved by the Institutional Animal Care and Use Committees (IACUC) at Thomas Jefferson University. Transgenic rat production The open reading frame (ORF) of the normal human fus gene was PCR-amplified from a human cDNA pool (Invitrogen) and the mutation was introduced by site-directed mutagenesis (Stratagene). The normal and mutant human FUS ORF were inserted downstream of the TRE promoter as described previously [34]. Linearized transgenic DNA was purified from agar gel and injected into the pronuclei of fertilized eggs of Sprague-Dawley (SD) rats to produce transgenic founder rats [34], [35]. Transgenes were maintained on the SD genomic background and were identified by PCR analysis of rat's tail DNA. Animal behavior tests Grip strength of the rat's fore and hind paws was measured twice a week (Columbus Instruments) and used for determining disease onset and progression. Disease onset was defined as an unrecoverable reduction in the grip strength of fore or hind paws. Disease end-stage was defined as paralysis in two or more legs or as a 30% reduction in body weight. Spatial learning and memory tasks were examined with a Barnes Maze (Med Associates). Compared to Morris Water Maze or Radial Arm Maze, the Barnes Maze not only avoids dietary restriction and intense stress, but also gives comparable results on rodent's spatial learning and memory tasks [48], [49]. The Barnes Maze consists of a white, acrylic, circular disk (122 cm diameter) with 18 holes (9.5 cm diameter) spaced every 20° and a high stand (140 cm height) supporting the disk that is designed to discourage animals from jumping to the floor. Rats were given one training session and four test sessions for 5 consecutive days. During training or testing sessions, rats were placed in the same initial orientation inside a transparent cylinder (start box) that was located at the center of the maze disk and the rats remained in the start box for 1 minute such that a standard starting context was ensured. When a lamp above the maze was turned on to make the surface of the maze aversive, the start box was removed to allow the animal to escape the maze surface by locating and crawling through the correct hole under which a black safe box was located. When the animal entered the safe box, the light was turned off and the safe box was covered with a black sheet. The animal was allowed to stay in the safe box for 1 minute before it was placed back to its home cage. Before training, each rat was given 2 minutes to explore the maze and then placed inside the safe box for 1 minute for habituation. During training, each rat was guided to the safe box twice and then given two trials to locate the safe box by itself. During the test, rats were placed inside the start box for 1 minute to locate the fixed safe box. The number of incorrect hole pokes (error) and the latency to locate the safe box were recorded. An incorrect hole poke was indicated when an animal closely approached and visually inspected a wrong hole. Latency to locate the safe box was calculated from the time testing started to the time when the animal entered, or its four paws touched, the safe box. The maze was wiped clean with 70% ethanol and then with dry paper towel after each test to prevent animals following odor trails. Antibody production An antibody to human FUS was produced by immunizing rabbits with a synthetic peptide (Genemed): (N-terminal)-SYGQPQSGSYSQQPS. Antiserum was affinity-purified with a peptide-affinity column (Pierce). Histology and immunostaining Anesthetized rats were transcardially perfused with 4% paraformaldehyde (PFA) dissolved in 1X PBS buffer and tissues were dissected after perfusion. Tissues were cryopreserved in 40% sucrose and cut into sections on a Cryostat. Tissue sections of 12 µm were immunostained with the following antibodies: rabbit polyclonal antibody to human FUS (made in-house), chicken antibody to ubiquitin (Sigma), mouse monoclonal antibodies against Iba-1 (Wako Chemical) or GFAP (Millipore), and mouse monoclonal antibody against NeuN (Millipore). For histochemistry, immunostained sections were visualized with an ABC kit in combination with diaminobenzidine (Vector) and counterstained with hematoxylin to display nuclei. For immunofluorescent staining, tissue sections were incubated first with specific primary antibodies and then with secondary antibodies labeled with fluorescent dyes (Jackson Immunoresearch). Primary antibodies were diluted at 1∶1000 and secondary antibodies diluted at 1∶200. The primary antibodies were incubated overnight at 4°C and the secondary antibodies were incubated for 2 hours at room temperature. For detection of degenerating neurons, paraffin-embedded spinal cords were cut into transverse sections of 10 µm and stained using a protocol for Bielschowsky silver staining [34]. As described in a previous publication [34], neuromuscular junctions (NMJ) were visualized by immunofluorescent staining and confocal microscopy. PFA-fixed gastrocnemius muscles were cut into sections of 100 µm on a Cryostat. Muscle sections were incubated with α-bungarotoxin (Invitrogen) for 30 minutes at room temperature and subsequently immunostained with mouse monoclonal antibodies to neurofilament (Sigma) and synaptophysin (Millipore). Both primary and secondary antibodies were diluted at 1∶1000. The primary antibodies were incubated overnight at 4°C and the secondary antibodies were incubated for 2 hours at room temperature. NMJ images were captured with a Zeiss LSM510 META confocal system and the NMJ was reconstructed through z-stack projections from serial scanning every 1 µm. Toluidine blue staining and electron microscopy As described previously [34], anesthetized rats were perfused with a mixture of 4% PFA plus 2% glutaraldehyde. Cervical spinal cords and L3 ventral and dorsal roots were dissected and post-fixed in the same fixative at 4°C overnight. Fixed tissues were embedded in Epon 812 (Electron Microscopic Sciences, PA) and cut into semithin and thin sections. Semithin sections (1 µm) were stained with 1% toluidine blue and visualized under a light microscope. Thin sections (80 nm) were stained with uranyl acetate and lead citrate and observed under a transmission electron microscope (Hitachi H7500-I). Electromyography (EMG) Anesthetized rats were examined by EMG. Fibrillation and fasciculation potentials of gastrocnemius muscles were recorded with an EMG machine (CMS6600; COTEC Inc.) as previously described [34]. Stereological cell counting Motor neurons in the ventral horn of the L3 lumbar cord were stereologically counted as previously described [34]. Neurons larger than 25 µm in diameter were counted in the ventral horns on both sides. For estimation of neurons in the frontal cortex and dentate gyrus, one hemisphere of the brain was used for cell counting. The forebrain was cut into coronal sections of 30 µm between the apical rostral part of the brain and the first occurrence of hippocampus, and every 12th section (a total of 15 to 18 sections) was counted for neurons in the defined frontal cortex (Figure S3). The portion of the brain containing the dentate gyrus was cut into consecutive sections (20 µm) and every 12th section (a total of 16 to 21 sections) was counted for neurons in the dentate gyrus. Tissue sections were stained with Cresyl violet and mounted in sequential order (rostral-caudal). The number of targeted neurons was estimated using a fractionator-based unbiased stereology software program (Stereologer) run on a PC computer that was attached to a Nikon 80i microscope fitted with a motorized XYZ stage (Prior). At low magnification, the targeting area was outlined and a random sampling grid was created. At high magnification, an optical dissector probe in the designated area was randomly generated by the program. The presence of clearly definable neurons was noted according to defined inclusion and exclusion limits of the dissector. This process was repeated on all selected sections. The total number of defined neurons was calculated by the software according to the result of random counts as previously described [34]. Statistical analysis The number of defined neurons in the defined region was statistically compared between groups of transgenic rats and comparison among experimental groups was performed by one-way ANOVA followed by Tukey's post-hoc test. The null hypothesis was rejected at the level of 0.05. Supporting Information Figure S1 Recovery of FUS transgene expression after Dox withdrawal. Female rats of lines 20 (normal human FUS) and 22 (human FUS with R521C substitution) were mated with CAG-tTA homozygous male rats. The breeding rats were constantly given Dox in drinking water (50 µg/ml) and were deprived of Dox upon delivery. Forebrain of double transgenic offspring was collected at defined time and homogenized for immunoblotting analysis. Each lane was loaded with 20 µg of total protein in brain lysate. Immunoreactivity to human FUS was detected with a peptide antibody (made-in-house). After stringent stripping, the same membrane was probed with an antibody against GAPDH and the immunoreactivity to GAPDH was used as an internal control for equal loading. The symbol * indicates a non-specific band on FUS immunoblotting. (TIF) Click here for additional data file. Figure S2 Expression profile of human FUS in FUS transgenic rats. Transgenic rats of lines 20 22 (human FUS with R521C substitution) were mated with CAG-tTA homozygous male rats to produce double transgenic offspring that was examined for FUS expression by immunoblotting. Each lane was loaded with 20 µg of total protein in tissue lysates. Immunoreactivity to human FUS was detected with a peptide antibody (made-in-house). (TIF) Click here for additional data file. Figure S3 Partial frontal and parietal cortices were defined as the "frontal cortex" region for stereological counting of neurons. Olfactory bulb was cut away and one hemisphere was cut into coronal sections of 30 µm from the rostral to the caudal. Between the apical rostral part and the first occurrence of corpus callosum, the whole cortex was included in “frontal cortex”. The first occurrence of hippocampus was considered the caudal border of “frontal cortex”. Between the first occurrence of corpus callosum and the first occurrence of hippocampus, a line was drawn in parallel to the medial side of hemisphere and then the first vertical line was drawn (green). In parallel to the first vertical line, the second vertical line (red) was drawn to pass by the top of corpus callosum and was used to define the frontal and parietal cortex. Representative photos show the delineation (red circle) of “frontal cortex” for neuron counting. About 200 sections were collected for each hemisphere and every twelfth section was counted for neurons. Scale bars: 800 µm. (TIF) Click here for additional data file. Figure S4 Colocalization of ubiquitinated aggregates with mitochondrial marker in FUS transgenic rats. a-c, Double-fluorescence labeling shows that ubiquitinated aggregates (a) were colocalized with the mitochondrial marker COXIV (b) in the frontal cortex of a mutant FUS transgenic rat at paralysis stage. Arrows point to COXIV stained structures inside a cortical neuron. Scale bars: 10 µm. (TIF) Click here for additional data file. Table S1 A summary of human FUS transgenic rat lines created. Multiple lines of transgenic rats were created by pronuclear injection of human FUS transgene and two mutant FUS transgenic lines developed disease phenotypes. (DOC) Click here for additional data file. Video S1 This video recorded four mutant FUS transgenic rats of line 22 and one non-transgenic littermate at the age of 30 days. The mutant FUS transgenic rats were at varying disease stages and all were paralyzed by the age of 40 days. A photo of the paralyzed rat was shown in Figure 1G. (WMV) Click here for additional data file. Video S2 This video recorded one mutant FUS transgenic rat of line 16 and one non-transgenic littermate at the age of 56 days. The mutant FUS transgenic rat was paralyzed 4 days later. A photo of the mutant rat was taken 4 days later and was shown in Figure 1H. (WMV) Click here for additional data file.