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      The Transcription Factor TFII-I Promotes DNA Translesion Synthesis and Genomic Stability

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          Abstract

          Translesion synthesis (TLS) enables DNA replication through damaged bases, increases cellular DNA damage tolerance, and maintains genomic stability. The sliding clamp PCNA and the adaptor polymerase Rev1 coordinate polymerase switching during TLS. The polymerases Pol η, ι, and κ insert nucleotides opposite damaged bases. Pol ζ, consisting of the catalytic subunit Rev3 and the regulatory subunit Rev7, then extends DNA synthesis past the lesion. Here, we show that Rev7 binds to the transcription factor TFII-I in human cells. TFII-I is required for TLS and DNA damage tolerance. The TLS function of TFII-I appears to be independent of its role in transcription, but requires homodimerization and binding to PCNA. We propose that TFII-I bridges PCNA and Pol ζ to promote TLS. Our findings extend the general principle of component sharing among divergent nuclear processes and implicate TLS deficiency as a possible contributing factor in Williams-Beuren syndrome.

          Author Summary

          DNA translesion synthesis (TLS) allows the DNA replication machinery to replicate past damaged bases, thus increasing cellular tolerance for DNA damage and maintaining genomic stability. Suppression of TLS is expected to enhance the efficacy of the anti-cancer drug, cisplatin. TLS employs a special set of DNA polymerases, including Pol ζ. The TLS polymerases are also involved in somatic hypermutation and proper immune response in mammals. Thus, it is critical to understand the underlying mechanisms of TLS. In this study, we have discovered the transcription factor TFII-I as a new Pol ζ-binding protein in human cells. We show that TFII-I is indeed required for TLS and DNA damage tolerance. We further delineate the mechanism by which TFII-I contributes to TLS. Our study significantly advances the molecular understanding of TLS, and provides a fascinating example of component sharing among disparate nuclear processes. Finally, because one copy of the TFII-I gene is deleted in Williams-Beuren syndrome (WBS), our work implicates TLS deficiency as a potential causal factor of this human genetic disorder.

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          Most cited references45

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          Y-family DNA polymerases and their role in tolerance of cellular DNA damage.

          The past 15 years have seen an explosion in our understanding of how cells replicate damaged DNA and how this can lead to mutagenesis. The Y-family DNA polymerases lie at the heart of this process, which is commonly known as translesion synthesis. This family of polymerases has unique features that enable them to synthesize DNA past damaged bases. However, as they exhibit low fidelity when copying undamaged DNA, it is essential that they are only called into play when they are absolutely required. Several layers of regulation ensure that this is achieved.
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            Williams-Beuren syndrome.

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              Principles of ubiquitin and SUMO modifications in DNA repair.

              With the discovery in the late 1980s that the DNA-repair gene RAD6 encodes a ubiquitin-conjugating enzyme, it became clear that protein modification by ubiquitin conjugation has a much broader significance than had previously been assumed. Now, two decades later, ubiquitin and its cousin SUMO are implicated in a range of human diseases, including breast cancer and Fanconi anaemia, giving fresh momentum to studies focused on the relationships between ubiquitin, SUMO and DNA-repair pathways.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Genet
                PLoS Genet
                plos
                plosgen
                PLoS Genetics
                Public Library of Science (San Francisco, USA )
                1553-7390
                1553-7404
                June 2014
                12 June 2014
                : 10
                : 6
                : e1004419
                Affiliations
                [1 ]Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
                [2 ]Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
                [3 ]Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
                [4 ]Division of Molecular Radiation Biology, Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
                [5 ]Department of Pathology and Laboratory Medicine, Weill Medical College of Cornell University, New York, New York, United States of America
                SUNY Stony Brook, United States of America
                Author notes

                The authors have declared that no competing interests exist.

                Conceived and designed the experiments: FJF DJC PZ DAB HY. Performed the experiments: FJF KH KRF CY NW RW. Analyzed the data: FJF KH KRF CY NW RW HY. Wrote the paper: HY.

                Article
                PGENETICS-D-13-01993
                10.1371/journal.pgen.1004419
                4055408
                24922507
                20c49889-6893-4d47-96fa-4314165223c5
                Copyright @ 2014

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 25 July 2013
                : 20 April 2014
                Page count
                Pages: 12
                Funding
                This research was supported in part by grants from Cancer Prevention and Research Institute of Texas (RP110465-P1 to DJC and RP110465-P3 to HY), the Welch Foundation (I-1441 to HY), and the Clayton Foundation (to HY). This work was also supported by a grant from the National Institutes of Health (CA139217 to DAB). HY is an Investigator with the Howard Hughes Medical Institute. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology and Life Sciences
                Biochemistry
                Genetics

                Genetics
                Genetics

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