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      Identification of Palmitoyltransferase and Thioesterase Enzymes That Control the Subcellular Localization of Axon Survival Factor Nicotinamide Mononucleotide Adenylyltransferase 2 (NMNAT2)*

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          Abstract

          Background: Axon survival factor nicotinamide mononucleotide adenylyltransferase 2 (NMNAT2) is targeted to Golgi membranes through palmitoylation, resulting in its rapid turnover and axon degeneration.

          Results: Thioesterases APT1/APT2 depalmitoylate NMNAT2 and zDHHC17 is the strongest candidate palmitoyltransferase for NMNAT2.

          Conclusion: Depalmitoylation is insufficient to release NMNAT2 from membranes, suggesting palmitoylation-independent mechanisms contribute to membrane association.

          Significance: Modulation of NMNAT2 subcellular localization could delay axon degeneration in neurodegenerative disease.

          Abstract

          The NAD-synthesizing enzyme nicotinamide mononucleotide adenylyltransferase 2 (NMNAT2) is a critical survival factor for axons and its constant supply from neuronal cell bodies into axons is required for axon survival in primary culture neurites and axon extension in vivo. Recently, we showed that palmitoylation is necessary to target NMNAT2 to post-Golgi vesicles, thereby influencing its protein turnover and axon protective capacity. Here we find that NMNAT2 is a substrate for cytosolic thioesterases APT1 and APT2 and that palmitoylation/depalmitoylation dynamics are on a time scale similar to its short half-life. Interestingly, however, depalmitoylation does not release NMNAT2 from membranes. The mechanism of palmitoylation-independent membrane attachment appears to be mediated by the same minimal domain required for palmitoylation itself. Furthermore, we identify several zDHHC palmitoyltransferases that influence NMNAT2 palmitoylation and subcellular localization, among which a role for zDHHC17 (HIP14) in neuronal NMNAT2 palmitoylation is best supported by our data. These findings shed light on the enzymatic regulation of NMNAT2 palmitoylation and highlight individual thioesterases and palmitoyltransferases as potential targets to modulate NMNAT2-dependent axon survival.

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          Most cited references41

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          Synaptic strength regulated by palmitate cycling on PSD-95.

          Dynamic regulation of AMPA-type glutamate receptors represents a primary mechanism for controlling synaptic strength, though mechanisms for this process are poorly understood. The palmitoylated postsynaptic density protein, PSD-95, regulates synaptic plasticity and associates with the AMPA receptor trafficking protein, stargazin. Here, we identify palmitate cycling on PSD-95 at the synapse and find that palmitate turnover on PSD-95 is regulated by glutamate receptor activity. Acutely blocking palmitoylation disperses synaptic clusters of PSD-95 and causes a selective loss of synaptic AMPA receptors. We also find that rapid glutamate-mediated AMPA receptor internalization requires depalmitoylation of PSD-95. In a nonneuronal model system, clustering of PSD-95, stargazin, and AMPA receptors is also regulated by ongoing palmitoylation of PSD-95 at the plasma membrane. These studies suggest that palmitate cycling on PSD-95 can regulate synaptic strength and regulates aspects of activity-dependent plasticity.
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            DHHC palmitoyl transferases: substrate interactions and (patho)physiology.

            S-palmitoylation is a reversible post-translational modification that occurs on diverse cellular proteins. Palmitoylation can affect proteins in many different ways, including regulating membrane attachment, intracellular trafficking, and membrane micro-localisation. Intracellular palmitoylation reactions are mediated by a family of recently identified aspartate-histidine-histidine-cysteine (DHHC) palmitoyl transferases. More than 20 DHHC proteins are encoded by mammalian genomes, and there is now a major effort to identify DHHC-substrate pairings and to determine how interaction specificity is encoded. Recent studies have highlighted how DHHC proteins regulate cell function and influence physiology and pathophysiology. Copyright © 2011 Elsevier Ltd. All rights reserved.
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              Small-molecule inhibition of APT1 affects Ras localization and signaling.

              Cycles of depalmitoylation and repalmitoylation critically control the steady-state localization and function of various peripheral membrane proteins, such as Ras proto-oncogene products. Interference with acylation using small molecules is a strategy to modulate cellular localization--and thereby unregulated signaling--caused by palmitoylated Ras proteins. We present the knowledge-based development and characterization of a potent inhibitor of acyl protein thioesterase 1 (APT1), a bona fide depalmitoylating enzyme that is, so far, poorly characterized in cells. The inhibitor, palmostatin B, perturbs the cellular acylation cycle at the level of depalmitoylation and thereby causes a loss of the precise steady-state localization of palmitoylated Ras. As a consequence, palmostatin B induces partial phenotypic reversion in oncogenic HRasG12V-transformed fibroblasts. We identify APT1 as one of the thioesterases in the acylation cycle and show that this protein is a cellular target of the inhibitor.
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                Author and article information

                Journal
                J Biol Chem
                J. Biol. Chem
                jbc
                jbc
                JBC
                The Journal of Biological Chemistry
                American Society for Biochemistry and Molecular Biology (9650 Rockville Pike, Bethesda, MD 20814, U.S.A. )
                0021-9258
                1083-351X
                21 November 2014
                30 September 2014
                30 September 2014
                : 289
                : 47
                : 32858-32870
                Affiliations
                [1]From the Babraham Institute, Babraham Research Campus, Cambridge CB22 3AT, United Kingdom
                Author notes
                [1 ] To whom correspondence should be addressed. Tel.: 0044-0-1223-496315; Fax: 0044-0-1223-496348; E-mail: michael.coleman@ 123456babraham.ac.uk .
                Article
                M114.582338
                10.1074/jbc.M114.582338
                4239634
                25271157
                24cb7371-ab52-4e47-b3cd-b6bcb99cf990
                © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

                Author's Choice—Final version full access.

                Creative Commons Attribution Unported License applies to Author Choice Articles

                History
                : 16 May 2014
                : 29 September 2014
                Categories
                Neurobiology

                Biochemistry
                enzyme,intracellular trafficking,neurodegeneration,protein acylation,protein palmitoylation,apt1,apt2,nmnat2,palmitoyltransferase,zdhhc17

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