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      Effects of Oat Hay Content in Diets on Nutrient Metabolism and the Rumen Microflora in Sheep

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          Providing high-quality forage for the animal husbandry to improve the quality of animal husbandry products and meet the needs of the public is one of the focuses of the current animal husbandry development. Oats have high nutritional value, and the planting area in our country is increasing year by year. It has become the new favorite of the breeding industry, and its development prospects are very broad. At present, there are few domestic research reports on the best addition of oat hay in ruminant diets, ruminant digestion and metabolism, and ruminant flora. Therefore, the purpose of this study is to add different proportions of oat hay to sheep feed to study its effect on sheep digestion and metabolism and rumen microflora. The experimentally obtained data showed that, with the increase in the content of oat hay in the diet, the appearance of sheep dry matter (DM), organic matter (OM), acid detergent fiber (ADF), and neutral detergent fiber (NDF) digestibility, as well as the diversity and abundance of rumen microbes, showed an upward trend. All presented data provide a theoretical basis for the scientific application of oat hay in sheep breeding.

          Abstract

          Oats have the characteristics of drought tolerance, cold resistance, strong adaptability, high forage yield, and high nutritional value. However, there are few reports on the most appropriate amount of oat hay in ruminant diets, the digestion and metabolism of ruminants, and the rumen microflora. To study the effects of oat hay content in diets on nutrient digestion and metabolism and the rumen microflora in sheep, 9 German Merino and Mongolian crossbred rams of similar body condition and weight with permanent fistulas were selected. The 3 × 3 Latin square design was used to randomly divide the rams into 3 groups, with 3 animals in each group. The three groups were fed different kinds of roughage: whole-plant corn silage only (corn silage group, CSG), oat hay mixed with whole-plant corn silage (1:1) (mixed group, MG), and oat hay only (oat hay group, OHG). The nutrient digestion and metabolism of each group were measured, and the pH and rumen microflora were examined after feeding for different durations. Dynamic changes in microbial communities were detected. The nutrient digestion and metabolism results showed that, with an increase in the content of oat hay in the diet, the intake and apparent digestibility of dry matter (DM) and organic matter (OM) showed an increasing trend, and the intake, digestion, and stability of acid detergent fiber (ADF) and neutral detergent fiber (NDF) increased in the OHG. The apparent digestibility, dietary nitrogen, deposited nitrogen, and nitrogen retention rate in this group were significantly higher than those in the CSG ( p < 0.05). The rumen pH and sequencing results showed that the rumen fluid pH of the CSG was significantly lower than that of the OHG at 1 and 5 h ( p < 0.05). The main microbial in the rumen of the three groups of sheep were Bacteroides, Sclerotium, and Proteus. The dominant taxon in the CSG was Prevotella, followed by Vibrio syringae, and the dominant taxon in the MG and OHG was Prevotella, followed by Rikenellaceae. Redundancy analysis showed that ADF and NDF in the feed had an effect on the abundance of Fibrobacteres, Ruminococcaceae, and Prevotella. Our findings indicate that the use of oat hay roughage in the diet significantly improves the apparent digestibility of NDF and ADF and helps maintain the stable state of the sheep’s rumen internal environment and the growth of rumen microorganisms.

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          Most cited references47

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          QIIME allows analysis of high-throughput community sequencing data.

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            FLASH: fast length adjustment of short reads to improve genome assemblies.

            Next-generation sequencing technologies generate very large numbers of short reads. Even with very deep genome coverage, short read lengths cause problems in de novo assemblies. The use of paired-end libraries with a fragment size shorter than twice the read length provides an opportunity to generate much longer reads by overlapping and merging read pairs before assembling a genome. We present FLASH, a fast computational tool to extend the length of short reads by overlapping paired-end reads from fragment libraries that are sufficiently short. We tested the correctness of the tool on one million simulated read pairs, and we then applied it as a pre-processor for genome assemblies of Illumina reads from the bacterium Staphylococcus aureus and human chromosome 14. FLASH correctly extended and merged reads >99% of the time on simulated reads with an error rate of <1%. With adequately set parameters, FLASH correctly merged reads over 90% of the time even when the reads contained up to 5% errors. When FLASH was used to extend reads prior to assembly, the resulting assemblies had substantially greater N50 lengths for both contigs and scaffolds. The FLASH system is implemented in C and is freely available as open-source code at http://www.cbcb.umd.edu/software/flash. t.magoc@gmail.com.
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              UPARSE: highly accurate OTU sequences from microbial amplicon reads.

              Amplified marker-gene sequences can be used to understand microbial community structure, but they suffer from a high level of sequencing and amplification artifacts. The UPARSE pipeline reports operational taxonomic unit (OTU) sequences with ≤1% incorrect bases in artificial microbial community tests, compared with >3% incorrect bases commonly reported by other methods. The improved accuracy results in far fewer OTUs, consistently closer to the expected number of species in a community.
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                Author and article information

                Journal
                Animals (Basel)
                Animals (Basel)
                animals
                Animals : an Open Access Journal from MDPI
                MDPI
                2076-2615
                09 December 2020
                December 2020
                : 10
                : 12
                : 2341
                Affiliations
                [1 ]College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China; 18393811056@ 123456163.com (X.A.); zhanglingyun1110@ 123456163.com (L.Z.); luojing1286367055@ 123456163.com (J.L.)
                [2 ]Key Laboratory of Grassland Ecosystem, Gansu Agricultural University, Lanzhou 730070, China
                [3 ]College of Grassland Science, Gansu Agricultural University, Lanzhou 730070, China
                Author notes
                [* ]Correspondence: zhaosg@ 123456gsau.edu.cn (S.Z.); jiaot@ 123456gsau.edu.cn (T.J.); Tel.: +86-1891-9801-364 (S.Z.); +86-1360-9304-144 (T.J.); Fax: +86-0931-7642-468 (S.Z.); +86-0931-642-468 (T.J.)
                Author information
                https://orcid.org/0000-0001-8744-375X
                Article
                animals-10-02341
                10.3390/ani10122341
                7763615
                33317030
                254d528e-c4f9-448a-a320-0d0c1adae020
                © 2020 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 03 November 2020
                : 29 November 2020
                Categories
                Article

                oat hay,16s rrna,microorganisms,sheep
                oat hay, 16s rrna, microorganisms, sheep

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