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      Clinical presentation and proteomic signature of patients with TANGO2 mutations

      research-article
      1 , 2 , 3 , 4 , 5 , 6 , 7 , 7 , 7 , 8 , 7 , 8 , 8 , 9 , 3 , 10 , 11 , 11 , 11 , 11 , 11 , 5 , 11 , 12 , 12 , 13 , 13 , 14 , 14 , 14 , 15 , 16 , 7 , 17 , 18 , 18 , 19 , 20 , 11 , 11 , 1 , 21 , 22 , 11 , 7 , 11 , 1 , 2 , 4 , 23 ,   3 , 24 ,
      Journal of Inherited Metabolic Disease
      John Wiley & Sons, Inc.
      fatty acid metabolism, metabolic encephalomyopathy, mitochondrial dysfunction, proteomic analysis, rhabdomyolysis, TANGO2

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          Abstract

          Transport And Golgi Organization protein 2 (TANGO2) deficiency has recently been identified as a rare metabolic disorder with a distinct clinical and biochemical phenotype of recurrent metabolic crises, hypoglycemia, lactic acidosis, rhabdomyolysis, arrhythmias, and encephalopathy with cognitive decline. We report nine subjects from seven independent families, and we studied muscle histology, respiratory chain enzyme activities in skeletal muscle and proteomic signature of fibroblasts. All nine subjects carried autosomal recessive TANGO2 mutations. Two carried the reported deletion of exons 3 to 9, one homozygous, one heterozygous with a 22q11.21 microdeletion inherited in trans. The other subjects carried three novel homozygous (c.262C>T/p.Arg88*; c.220A>C/p.Thr74Pro; c.380+1G>A), and two further novel heterozygous (c.6_9del/p.Phe6del); c.11‐13delTCT/p.Phe5del mutations. Immunoblot analysis detected a significant decrease of TANGO2 protein. Muscle histology showed mild variation of fiber diameter, no ragged‐red/cytochrome c oxidase‐negative fibers and a defect of multiple respiratory chain enzymes and coenzyme Q 10 (CoQ 10) in two cases, suggesting a possible secondary defect of oxidative phosphorylation. Proteomic analysis in fibroblasts revealed significant changes in components of the mitochondrial fatty acid oxidation, plasma membrane, endoplasmic reticulum‐Golgi network and secretory pathways. Clinical presentation of TANGO2 mutations is homogeneous and clinically recognizable. The hemizygous mutations in two patients suggest that some mutations leading to allele loss are difficult to detect. A combined defect of the respiratory chain enzymes and CoQ 10 with altered levels of several membrane proteins provides molecular insights into the underlying pathophysiology and may guide rational new therapeutic interventions.

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          Most cited references20

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          Functional genomics reveals genes involved in protein secretion and Golgi organization.

          Yeast genetics and in vitro biochemical analysis have identified numerous genes involved in protein secretion. As compared with yeast, however, the metazoan secretory pathway is more complex and many mechanisms that regulate organization of the Golgi apparatus remain poorly characterized. We performed a genome-wide RNA-mediated interference screen in a Drosophila cell line to identify genes required for constitutive protein secretion. We then classified the genes on the basis of the effect of their depletion on organization of the Golgi membranes. Here we show that depletion of class A genes redistributes Golgi membranes into the endoplasmic reticulum, depletion of class B genes leads to Golgi fragmentation, depletion of class C genes leads to aggregation of Golgi membranes, and depletion of class D genes causes no obvious change. Of the 20 new gene products characterized so far, several localize to the Golgi membranes and the endoplasmic reticulum.
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            The myopathic form of coenzyme Q10 deficiency is caused by mutations in the electron-transferring-flavoprotein dehydrogenase (ETFDH) gene.

            Coenzyme Q10 (CoQ10) deficiency is an autosomal recessive disorder with heterogenous phenotypic manifestations and genetic background. We describe seven patients from five independent families with an isolated myopathic phenotype of CoQ10 deficiency. The clinical, histological and biochemical presentation of our patients was very homogenous. All patients presented with exercise intolerance, fatigue, proximal myopathy and high serum CK. Muscle histology showed lipid accumulation and subtle signs of mitochondrial myopathy. Biochemical measurement of muscle homogenates showed severely decreased activities of respiratory chain complexes I and II + III, while complex IV (COX) was moderately decreased. CoQ10 was significantly decreased in the skeletal muscle of all patients. Tandem mass spectrometry detected multiple acyl-CoA deficiency, leading to the analysis of the electron-transferring-flavoprotein dehydrogenase (ETFDH) gene, previously shown to result in another metabolic disorder, glutaric aciduria type II (GAII). All of our patients carried autosomal recessive mutations in ETFDH, suggesting that ETFDH deficiency leads to a secondary CoQ10 deficiency. Our results indicate that the late-onset form of GAII and the myopathic form of CoQ10 deficiency are allelic diseases. Since this condition is treatable, correct diagnosis is of the utmost importance and should be considered both in children and in adults. We suggest to give patients both CoQ10 and riboflavin supplementation, especially for long-term treatment.
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              Mitochondrial localization and function of a subset of 22q11 deletion syndrome candidate genes.

              Six genes in the 1.5 Mb region of chromosome 22 deleted in DiGeorge/22q11 deletion syndrome-Mrpl40, Prodh, Slc25a1, Txnrd2, T10, and Zdhhc8-encode mitochondrial proteins. All six genes are expressed in the brain, and maximal expression coincides with peak forebrain synaptogenesis shortly after birth. Furthermore, their protein products are associated with brain mitochondria, including those in synaptic terminals. Among the six, only Zddhc8 influences mitochondria-regulated apoptosis when overexpressed, and appears to interact biochemically with established mitochondrial proteins. Zdhhc8 has an apparent interaction with Uqcrc1, a component of mitochondrial complex III. The two proteins are coincidently expressed in pre-synaptic processes; however, Zdhhc8 is more frequently seen in glutamatergic terminals. 22q11 deletion may alter metabolic properties of cortical mitochondria during early post-natal life, since expression complex III components, including Uqcrc1, is significantly increased at birth in a mouse model of 22q11 deletion, and declines to normal values in adulthood. Our results suggest that altered dosage of one, or several 22q11 mitochondrial genes, particularly during early post-natal cortical development, may disrupt neuronal metabolism or synaptic signaling.
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                Author and article information

                Contributors
                rh732@medschl.cam.ac.uk
                Journal
                J Inherit Metab Dis
                J. Inherit. Metab. Dis
                10.1002/(ISSN)1573-2665
                JIMD
                Journal of Inherited Metabolic Disease
                John Wiley & Sons, Inc. (Hoboken, USA )
                0141-8955
                1573-2665
                13 August 2019
                March 2020
                : 43
                : 2 ( doiID: 10.1002/jimd.v43.2 )
                : 297-308
                Affiliations
                [ 1 ] Department of Neuropediatrics and Muscle Disorders Medical Center – University of Freiburg, Faculty of Medicine Breisgau Germany
                [ 2 ] Department of General Pediatrics Adolescent Medicine and Neonatology, Medical Center – University of Freiburg, Faculty of Medicine Breisgau Germany
                [ 3 ] Wellcome Centre for Mitochondrial Research Institute of Genetic Medicine, Newcastle University Newcastle upon Tyne UK
                [ 4 ] Biomedical Research Department Leibniz‐Institut für Analytische Wissenschaften – ISAS – e.V Dortmund Germany
                [ 5 ] Wellcome Centre for Mitochondrial Research Institute of Neuroscience, Newcastle University Newcastle upon Tyne UK
                [ 6 ] Institute of Clinical Genetics and Tumor Genetics Bonn Germany
                [ 7 ] Kid's Neuroscience Centre, Children's Hospital at Westmead Sydney New South Wales Australia
                [ 8 ] Discipline of Child and Adolescent Health The University of Sydney Sydney New South Wales Australia
                [ 9 ] Cardiology The Children's Hospital at Westmead Sydney New South Wales Australia
                [ 10 ] John Walton Muscular Dystrophy Research Centre Institute of Genetic Medicine, Newcastle University Newcastle upon Tyne UK
                [ 11 ] Department of Clinical Biochemistry, Genetics, Pediatric Neurology and Cardiology and Biobank Institut de Recerca Sant Joan de Déu and CIBERER, Instituto de Salud Carlos III Barcelona Barcelona Spain
                [ 12 ] Birmingham Women's and Children's NHS Foundation Trust Birmingham UK
                [ 13 ] Department of Inherited Disease St Thomas Hospital London UK
                [ 14 ] South West Regional Metabolic Department Bristol Royal Hospital for Children Bristol UK
                [ 15 ] Center for Mendelian Genomics and Program in Medical and Population Genetics Broad Institute of MIT and Harvard Cambridge Massachusetts
                [ 16 ] Analytic and Translational Genetics Unit Massachusetts General Hospital Boston Massachusetts
                [ 17 ] Centro Andaluz de Biología del Desarrollo Uníversidad Pablo de Olavide‐CSIC‐JA and CIBERER, Instituto de Salud Carlos III Madrid Spain
                [ 18 ] Secció d'Errors Congènits del Metabolisme – IBC Servei de Bioquímica I Genètìca Molecular, Hospital Clínìc, IDIBAPS, CIBERER Barcelona Spain
                [ 19 ] Neurometabolic Diseases Laboratory, Institut d'Investìgacío Biomedíca de Bellvitge (IDIBELL), and Centre for Biomedical Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III Madrid Spain
                [ 20 ] Catalan Institution of Research and Advanced Studies (ICREA) Barcelona Spain
                [ 21 ] Children's Hospital of Eastern Ontario Research Institute, University of Ottawa Ottawa Ontario Canada
                [ 22 ] Division of Neurology, Department of Medicine The Ottawa Hospital Ottawa Ontario Canada
                [ 23 ] Pediatric Neurology University Children's Hospital, University of Duisburg‐Essen, Faculty of Medicine Essen Germany
                [ 24 ] Department of Clinical Neurosciences University of Cambridge Cambridge UK
                Author notes
                [*] [* ] Correspondence

                Rita Horvath, Department of Clinical Neurosciences, University of Cambridge, John Van Geest Cambridge Centre for Brain Repair, Robinson Way, Cambridge CB2 0PY, UK.

                Email: rh732@ 123456medschl.cam.ac.uk

                Article
                JIMD12156
                10.1002/jimd.12156
                7078914
                31339582
                257c5c97-8416-44fc-90dc-9ebd6b709bab
                © 2019 The Authors. Journal of Inherited Metabolic Disease published by John Wiley & Sons Ltd on behalf of SSIEM

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 25 April 2019
                : 17 July 2019
                : 18 July 2019
                Page count
                Figures: 3, Tables: 1, Pages: 12, Words: 6820
                Funding
                Funded by: Agència de Gestió d'Ajuts Universitaris i de Recerca (AGAUR)
                Award ID: 2014: SGR 393
                Funded by: Association Française contre les Myopathies (FR) , open-funder-registry 10.13039/100013465;
                Award ID: 21644
                Funded by: CERCA Programme/ Generalitat de Catalunya, the Hesperia Foundation, the Secretariat for Universities and Research of the Ministry of Business and Knowledge of the Government of Catalonia , open-funder-registry 10.13039/501100002809;
                Award ID: 2017SGR1206
                Funded by: European Research Council , open-funder-registry 10.13039/501100000781;
                Award ID: 309548
                Funded by: FEuropean Union Seventh Framework Programme
                Award ID: FP7/2007‐2013
                Funded by: Instituto de la Marató de TV3
                Award ID: 345/C/2014rm Care (CA)
                Funded by: Instituto de Salud Carlos III , open-funder-registry 10.13039/501100004587;
                Award ID: PI17‐01286
                Award ID: PI17/00109
                Award ID: PI16/00579
                Award ID: PI16/01048
                Award ID: PI14/00581
                Award ID: CP09/00011
                Funded by: Medical Research Council , open-funder-registry 10.13039/501100007155;
                Award ID: MR/N025431/1
                Funded by: Mitochondrial Disease Patient Cohort (UK) , open-funder-registry 10.13039/100007472;
                Award ID: G0800674
                Funded by: National Institute for Health Research (NIHR) doctoral fellowship
                Award ID: NIHR‐HCS‐D12‐03‐04
                Funded by: Newton Fund , open-funder-registry 10.13039/100010897;
                Award ID: MR/N027302/1
                Funded by: Wellcome Centre for Mitochondrial Research
                Award ID: 203105/Z/16/Z
                Funded by: Wellcome Investigator
                Award ID: 109915/Z/15/Z
                Funded by: Wellcome Trust Pathfinder Scheme
                Award ID: 201064/Z/16/Z
                Categories
                Original Article
                Original Articles
                Custom metadata
                2.0
                March 2020
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.7.8 mode:remove_FC converted:18.03.2020

                Internal medicine
                fatty acid metabolism,metabolic encephalomyopathy,mitochondrial dysfunction,proteomic analysis,rhabdomyolysis,tango2

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