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      Characterization of the complete mitochondrial genome of Neolissochilus hendersoni (Herre, 1940) (Cypriniformes: Cyprinidae)

      research-article
      a , a , a , a , b
      Mitochondrial DNA. Part B, Resources
      Taylor & Francis
      Complete mitochondrial genome, Cyprinidae, Neolissochilus hendersoni

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          Abstract

          The differentiation between Neolissochilus and Acrossocheilus species based only on morphology is ambiguous; however, phylogenetic analysis using their mitogenome sequences provides conclusive results. Here, the phylogenetic position of Neolissochilus hendersoni (Herre, 1940) was determined using its mitogenome data. Total DNA from N. hendersoni was sequenced using the Illumina NovaSeq6000 platform, and annotation of mitochondrial genes was performed using MITOS2. Phylogenetic trees were constructed using the complete mitogenomes of 16 fish species. The mitogenome of N. hendersoni was found to be 16584 bp long, containing two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and three non-coding control regions. The genome showed a slight A + T bias (A +  T = 56.46%). Most PCGs were found to be located on the L-strand. Results of the phylogenetic analysis showed that N. stracheyi is closely related to N. hendersoni. Our results will help to clarify the phylogenetic relationship between Neolissochilus and Acrossocheilus species.

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          Most cited references10

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          [Checklist of fishes of Yunnan].

          Xiao Chen (2013)
          Based on extant literatures and taking into accounts updated results of taxonomy and phylogeny, we have updated this checklist of fishes present in Yunnan, including the number of taxa and drainage areas. As of 2013, there were 13 orders, 42 families, 198 genera and 620 valid species recorded in Yunnan Province, of which 586 were native species, 34 alien species, 254 species endemic to Yunnan, and 152 species only occuring in Yunnan within China. The number of species in Yunnan accounts for 39.17% of China's total fish species (of which there are 1 583 recorded freshwater fish species according to data present in Fishbase), and of these 6 families and 66 genera only occur in Yunnan. The number of fish species of the six major drainages in Yunnan were as follows: 202 in Pearl River, 183 in Lancangjiang River (upper Mekong), 142 in Jinshajiang River (upper Yangtze), 120 in Red River, 84 in Irrawaddy Drainage, 77 in Nujiang-Salween Drainage. There are also 99 endangered species of fish occurring in Yunnan, among them 23 species protected by the national and/or the provincial government, including 2 species of national key protected animal class one, 4 species of national key protected animal class two, 17 species of Yunnan provincial protected animal. Totally, 43 species were listed in China Red Data Book of Endangered Animals, Pisces; 73 species were listed in China Species Red List Vol. 1; 50 species were listed in endangered categories of IUCN Red List; and 3 species were listed in the Appendix 2 of CITES. The Chinese name, Latin name, synomyns, distribution and literatures of the 620 species of fishes in Yunnan are listed.
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            The complete mitochondrial genome of Neolissochilus benasi (Cypriniformes: Cyprinidae)

            Abstract In this study, the complete mitochondrial genome of Neolissochilus benasi has been determined by polymerase chain reaction method for the first time. The overall base composition of N. benasi mitogenome is 31.8% for A, 27.4% for C, 15.9% for G and 25.0% for T. The percentage of G + C content is 41.3%. The mitogenome is a circular DNA molecule of 16 583 bp in length with a D-loop region and contains 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and 13 protein-coding genes. The mitochondrial genome sequencing for N. benasi in this study provides important molecular data for further evolutionary analysis for Cyprinoidea.
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              DNA barcoding revealed a new species of Neolissochilus Rainboth, 1985 from the Kaladan River of Mizoram, North East India

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                Author and article information

                Journal
                Mitochondrial DNA B Resour
                Mitochondrial DNA B Resour
                Mitochondrial DNA. Part B, Resources
                Taylor & Francis
                2380-2359
                15 January 2023
                2023
                15 January 2023
                : 8
                : 1
                : 133-135
                Affiliations
                [a ]College of Fisheries, Zhejiang Ocean University , Zhoushan, China
                [b ]College of Fisheries, Zhejiang Marine Fisheries Research Institute , Zhoushan, China
                Author notes
                CONTACT Ye Chen jimmycy85@ 123456163.com Zhejiang Marine Fisheries Research Institute , Zhoushan 316000, China
                Article
                2163598
                10.1080/23802359.2022.2163598
                9848313
                36685649
                27d6a399-4ab1-49d2-842c-e1d030b7ad42
                © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License ( http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                Page count
                Figures: 3, Tables: 1, Pages: 3, Words: 1477
                Categories
                Research Article
                Mitogenome Announcement

                complete mitochondrial genome,cyprinidae,neolissochilus hendersoni

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