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      Detection of a putative novel genotype of Ehrlichia sp. from opossums (Didelphis aurita) from Brazil Translated title: Detecção de um suposto novo genótipo de Ehrlichia sp. em gambás (Didelphis aurita) do Brasil

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          Abstract

          Abstract Erlichiosis affects humans and animals worldwide. Its distribution and prevalence depends on the presence of tick vectors and hosts in one geographic area. The aim of the present study was to investigate the occurrence of Ehrlichia spp. and Anaplasma spp. in opossums (Didelphis sp.) from the State of Rio de Janeiro, southeast Brazil. Blood samples from 37 animals were tested for these two pathogens using molecular methods. One animal (2.7%) was positive for Ehrlichia sp. by 16S rRNA-based nested PCR. In a phylogenetic analysis based on the 16S rRNA gene using the maximum likelihood method and the GTRGAMMA+I evolutionary model, we detected a novel Ehrlichia sp. genotype closely related to genotypes of E. canis previously reported in dogs from Brazil. To the authors’ knowledge, this is the first molecular detection of Ehrlichia sp. in opossums from this State in the southeastern region of the country.

          Translated abstract

          Resumo A erliquiose afeta seres humanos e animais em todo o mundo. Sua distribuição e prevalência dependem da presença de vetores de carrapatos e hospedeiros em uma área geográfica. O objetivo do presente estudo foi investigar a ocorrência de Ehrlichia sp. e Anaplasma sp. em gambás (Didelphis sp.) do Estado do Rio de Janeiro, sudeste do Brasil. Amostras de sangue de 37 animais foram testadas para estes dois patógenos usando métodos moleculares. Um animal (2,7%) foi positivo para Ehrlichia sp. baseado em 16S rRNA-nested PCR. Em uma análise filogenética baseada no gene 16S rRNA usando o método de máxima verossimilhança e o modelo evolutivo GTRGAMMA + I, detectamos um novo genótipo de Ehrlichia sp. intimamente relacionado a genótipos de E. canis previamente relatados em cães do Brasil. Para o conhecimento dos autores, esta é a primeira detecção molecular de Ehrlichia sp. em gambás deste estado na região sudeste do país.

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            Reorganization of genera in the families Rickettsiaceae and Anaplasmataceae in the order Rickettsiales: unification of some species of Ehrlichia with Anaplasma, Cowdria with Ehrlichia and Ehrlichia with Neorickettsia, descriptions of six new species combinations and designation of Ehrlichia equi and 'HGE agent' as subjective synonyms of Ehrlichia phagocytophila.

            The genera Anaplasma, Ehrlichia, Cowdria, Neorickettsia and Wolbachia encompass a group of obligate intracellular bacteria that reside in vacuoles of eukaryotic cells and were previously placed in taxa based upon morphological, ecological, epidemiological and clinical characteristics. Recent genetic analyses of 16S rRNA genes, groESL and surface protein genes have indicated that the existing taxa designations are flawed. All 16S rRNA gene and groESL sequences deposited in GenBank prior to 2000 and selected sequences deposited thereafter were aligned and phylogenetic trees and bootstrap values were calculated using the neighbour-joining method and compared with trees generated with maximum-probability, maximum-likelihood, majority-rule consensus and parsimony methods. Supported by bootstrap probabilities of at least 54%, 16S rRNA gene comparisons consistently clustered to yield four distinct clades characterized roughly as Anaplasma (including the Ehrlichia phagocytophila group, Ehrlichia platys and Ehrlichia bovis) with a minimum of 96.1% similarity, Ehrlichia (including Cowdria ruminantium) with a minimum of 97.7% similarity, Wolbachia with a minimum of 95.6% similarity and Neorickettsia (including Ehrlichia sennetsu and Ehrlichia risticii) with a minimum of 94.9% similarity. Maximum similarity between clades ranged from 87.1 to 94.9%. Insufficient differences existed among E. phagocytophila, Ehrlichia equi and the human granulocytic ehrlichiosis (HGE) agent to support separate species designations, and this group was at least 98.2% similar to any Anaplasma species. These 16S rRNA gene analyses are strongly supported by similar groESL clades, as well as biological and antigenic characteristics. It is proposed that all members of the tribes Ehrlichieae and Wolbachieae be transferred to the family Anaplasmataceae and that the tribe structure of the family Rickettsiaceae be eliminated. The genus Anaplasma should be emended to include Anaplasma (Ehrlichia) phagocytophila comb. nov. (which also encompasses the former E. equi and the HGE agent), Anaplasma (Ehrlichia) bovis comb. nov. and Anaplasma (Ehrlichia) platys comb. nov., the genus Ehrlichia should be emended to include Ehrlichia (Cowdria) ruminantium comb. nov. and the genus Neorickettsia should be emended to include Neorickettsia (Ehrlichia) risticii comb. nov. and Neorickettsia (Ehrlichia) sennetsu comb. nov.
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              Nested PCR assay for detection of granulocytic ehrlichiae.

              A sensitive and specific nested PCR assay was developed for the detection of granulocytic ehrlichiae. The assay amplifies the 16S rRNA gene and was used to examine acute-phase EDTA-blood and serum samples obtained from seven humans with clinical presentations compatible with human granulocytic ehrlichiosis. Five of the seven suspected cases were positive by the PCR assay using DNA extracted from whole blood as the template, compared with a serologic assay that identified only one positive sample. The PCR assay using DNA extracted from the corresponding serum samples as the template identified three positive samples. The sensitivity of the assay on human samples was examined, and the limit of detection was shown to be fewer than 2 copies of the 16S rRNA gene. The application of the assay to nonhuman samples demonstrated products amplified from template DNA extracted from Ixodes scapularis ticks collected in Rhode Island and from EDTA-blood specimens obtained from white-tailed deer in Maryland. All PCR products were sequenced and identified as specific to granulocytic ehrlichiae. A putative variant granulocytic ehrlichia 16S rRNA gene sequence was detected among products amplified from both the ticks and the deer blood specimens.
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                Author and article information

                Contributors
                Role: ND
                Role: ND
                Role: ND
                Role: ND
                Role: ND
                Role: ND
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                Role: ND
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                Journal
                rbpv
                Revista Brasileira de Parasitologia Veterinária
                Rev. Bras. Parasitol. Vet.
                Colégio Brasileiro de Parasitologia Veterinária (Jaboticabal, SP, Brazil )
                0103-846X
                1984-2961
                November 2018
                : 0
                : 0
                Affiliations
                [02] Rio de Janeiro orgnameUniversidade Estácio de Sá orgdiv1Centro de Recuperação de Animais Silvestres Brazil
                [01] Seropédica Rio de Janeiro orgnameUniversidade Federal Rural do Rio de Janeiro orgdiv1Instituto de Veterinária orgdiv2Departamento de Medicina e Cirurgia Veterinária Brazil
                [03] Jaboticabal orgnameUniversidade Estadual Paulista orgdiv1Faculdade de Ciências Agrárias e Veterinárias orgdiv2Departamento de Patologia Veterinária Brazil
                Article
                12106 S1984-29612018005012106
                10.1590/s1984-296120180068
                30427523
                28075efe-3ae1-4cc5-83ef-d893db9c9750

                This work is licensed under a Creative Commons Attribution 4.0 International License.

                History
                : 30 May 2018
                : 20 August 2018
                Page count
                Figures: 0, Tables: 0, Equations: 0, References: 32, Pages: 0
                Product

                SciELO Brazil


                Gambá,Didelphis aurita,Ehrlichia,erliquiose,caracterização molecular,Brasil,Opossum,ehrlichiosis,molecular characterization,Brazil

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