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      Fully Automated Support System for Diagnosis of Breast Cancer in Contrast-Enhanced Spectral Mammography Images

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          Abstract

          Contrast-Enhanced Spectral Mammography (CESM) is a novelty instrumentation for diagnosing of breast cancer, but it can still be considered operator dependent. In this paper, we proposed a fully automatic system as a diagnostic support tool for the clinicians. For each Region Of Interest (ROI), a features set was extracted from low-energy and recombined images by using different techniques. A Random Forest classifier was trained on a selected subset of significant features by a sequential feature selection algorithm. The proposed Computer-Automated Diagnosis system is tested on 48 ROIs extracted from 53 patients referred to Istituto Tumori “Giovanni Paolo II” of Bari (Italy) from the breast cancer screening phase between March 2017 and June 2018. The present method resulted highly performing in the prediction of benign/malignant ROIs with median values of sensitivity and specificity of 87 . 5 % and 91 . 7 % , respectively. The performance was high compared to the state-of-the-art, even with a moderate/marked level of parenchymal background. Our classification model outperformed the human reader, by increasing the specificity over 8 % . Therefore, our system could represent a valid support tool for radiologists for interpreting CESM images, both reducing the false positive rate and limiting biopsies and surgeries.

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          Most cited references47

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          Object recognition from local scale-invariant features

          D.G. Lowe (1999)
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            Optimal classifier for imbalanced data using Matthews Correlation Coefficient metric

            Data imbalance is frequently encountered in biomedical applications. Resampling techniques can be used in binary classification to tackle this issue. However such solutions are not desired when the number of samples in the small class is limited. Moreover the use of inadequate performance metrics, such as accuracy, lead to poor generalization results because the classifiers tend to predict the largest size class. One of the good approaches to deal with this issue is to optimize performance metrics that are designed to handle data imbalance. Matthews Correlation Coefficient (MCC) is widely used in Bioinformatics as a performance metric. We are interested in developing a new classifier based on the MCC metric to handle imbalanced data. We derive an optimal Bayes classifier for the MCC metric using an approach based on Frechet derivative. We show that the proposed algorithm has the nice theoretical property of consistency. Using simulated data, we verify the correctness of our optimality result by searching in the space of all possible binary classifiers. The proposed classifier is evaluated on 64 datasets from a wide range data imbalance. We compare both classification performance and CPU efficiency for three classifiers: 1) the proposed algorithm (MCC-classifier), the Bayes classifier with a default threshold (MCC-base) and imbalanced SVM (SVM-imba). The experimental evaluation shows that MCC-classifier has a close performance to SVM-imba while being simpler and more efficient.
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              Robust wide-baseline stereo from maximally stable extremal regions

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                Author and article information

                Journal
                J Clin Med
                J Clin Med
                jcm
                Journal of Clinical Medicine
                MDPI
                2077-0383
                21 June 2019
                June 2019
                : 8
                : 6
                : 891
                Affiliations
                [1 ]Dip. di Diagnosi e Terapia per Immagini, I.R.C.C.S. Istituto Tumori “Giovanni Paolo II” di Bari, 70124 Bari, Italy; annarita.fanizzi.af@ 123456gmail.com (A.F.); lilianalosurdo@ 123456gmail.com (L.L.); v.didonna@ 123456oncologico.bari.it (V.D.); massafraraffaella@ 123456gmail.com (R.M.); d.laforgia@ 123456oncologico.bari.it (D.L.F.)
                [2 ]Dip. Interateneo di Fisica “M. Merlin”, Università degli Studi di Bari “A. Moro”, 70125 Bari, Italy; teresamaria.basile@ 123456uniba.it (T.M.A.B.); roberto.bellotti@ 123456uniba.it (R.B.)
                [3 ]Dip. di Scienze Fisiche, della Terra e dell’Ambiente, Università degli Studi di Siena, 53100 Siena, Italy; ubaldo.bottigli@ 123456unisi.it (U.B.); pasquale.delogu@ 123456unisi.it (P.D.)
                [4 ]INFN—Istituto Nazionale di Fisica Nucleare, Sezione di Bari, 70125 Bari, Italy; domenico.diacono@ 123456ba.infn.it (D.D.); angela.lombardi@ 123456ba.infn.it (A.L.)
                [5 ]Dip. di Diagnostica per Immagini, Azienda Ospedaliera Universitaria Senese, 53100 Siena, Italy; afausto@ 123456sirm.org
                [6 ]Dip. Area Medica, I.R.C.C.S. Istituto Tumori “Giovanni Paolo II” di Bari, 70124 Bari, Italy; v.lorusso@ 123456oncologico.bari.it
                Author notes
                [* ]Correspondence: Sonia.Tangaro@ 123456ba.infn.it ; Tel.: +39-080-544-2370
                [†]

                These authors contributed equally to this work.

                Author information
                https://orcid.org/0000-0002-2729-9896
                https://orcid.org/0000-0002-4964-7951
                https://orcid.org/0000-0003-2026-2000
                https://orcid.org/0000-0002-1372-3916
                Article
                jcm-08-00891
                10.3390/jcm8060891
                6616937
                31234363
                2a6ef24b-4074-4234-ace0-f5f80d01a3c2
                © 2019 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 30 April 2019
                : 17 June 2019
                Categories
                Article

                breast cancer,contrast-enhanced spectral mammography (cesm),background parenchymal enhancement (bpe),computer-automated diagnosis (cadx),feature extraction,machine learning techniques

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