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      Ageing or NOT, clock genes are important for memory processes: an interesting hypothesis raising many questions

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          Abstract

          Memory processes, such as acquisition, consolidation and retrieval are temporally regulated events. An intrinsic circadian (circa: about; dies: day) timing system influencing the dynamics in memory processing has been detected in animal models, ranging from invertebrates to mammalian species. Several recent investigations, addressing the molecular mechanism behind the circadian modulation of mnemonic processes shed light onto pathways known to be essential in memory processing, such as the cAMP-CREB-MAPK-pathway, which by itself is regulated by the circadian system. Notable, an important role for rhythmic clock gene expressions in the hippocampus and in hippocampus-dependent memory processes has been recently detected. However, the link between the circadian gating of memory processes and its importance for daily life remain highly elusive. In the here presented work [1], Kondratova and co-workers approached the possible effects of ageing on cognitive performances, with the experimental design taking the known parallel decline in functional integrity of the circadian system and cognitive performance into account. For this purpose, the authors used 3-4 months old mice that are deficient for central clock genes, and thus, no longer exhibit circadian rhythms. Importantly, among the mice used, was the Bmal1-deficient mouse strain, known for its accelerated ageing phenotype. Kondratova and co-workers observed that behaviors, such as habituation to a novel environment were altered in mice with deficiencies/mutations of core clock genes. Habituation to a novel environment can be considered a form of non-associative learning, and is dependent on (a) hippocampus-dependent working memory, a form of short-term memory with regards to intra-session habituation and (b) long-term memory for inter-session habituation. Bmal1- and Clock-knockout mice showed deficiencies in both types of habituation in contrast to Cry1/2-deficient mice that demonstrated facilitated habituation. The authors also proved by using an open field test that elevated anxiety, which often correlates with high locomotor activity and rearing, and deficits in contextual habituation does not attribute to deficits in behavioral learning in the here used clock-gene-knockout mice: Cry1,2-knockout mice showed facilitated habituation in parallel to elevated levels of anxiety, while Bmal1-knockout mice showed deficits in contextual habituation at significantly lower anxiety levels. The presented results confirm that a disruption of circadian clockwork impairs or facilitates in parallel the intra- and inter-session contextual habituation of mice. This observation acknowledges an essential regulatory role of core clock gene proteins in the herein analyzed behaviors, and thus in memory processes. If this is the case, then the interesting hypothesis, that an age-associated dampening in the amplitude of rhythmic core clock protein expressions, or alternative "ageing associated imbalance between circadian clock proteins", can be linked to age-associated declines in mental performances. Many questions remain: - Will an in depth comparative analyses of hippocampus-based behavior between wildtype and clock gene-deficient mice support the hypothesis? - Is the age-associated decline in clock gene expression hippocampus-specific, or a general phenomenon, and - Does the decline in clock gene expression amplitude or in phase-stability in the peripheral oscillator hippocampus, and/or in the brain circadian master clock residing in the hypothalamic suprachiasmatic nucleus (SCN) matter, with respect to the observed deterioration in mental performance? - Are the observed deficits in habituation in clock gene-deficient mice based on a hippocampal-intrinsic perturbation in time management, or - Is the disrupted temporal gating of hippocampal function related to the lesioned SCN clock in these knockout animals? - Is the observed impairment of long-term memory formation related to deficiencies of memory retrieval into working memory on the second day of habituation testing, rather than to impairments in memory consolidation? A clear answer to these urgent questions requires additional experiments, and demands the generation and investigation of a forebrain-specific conditional clock gene-knockout animal model. Then, the potential role of an ageing clockwork in the brain on mnemonic processes can be refined and attributed to a spatial component. So while the time is ripe to acknowledge the effect of ageing on the time-of-day dependency of cognitive performances, much work remains to support the here hypothesized link between ageing associated decline in circadian behavior and memory formation.

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          Unraveling the roles of WRN and DNA-PKcs at telomeres

          In eukaryotic cells, the ends of linear chromosomes are maintained by nucleoprotein complexes called telomeres, which are composed of long stretches of repetitive DNA sequences bound by specific telomere binding proteins. The repetitive DNA sequence (repeats of TTAGGG in humans) is composed of double stranded DNA and, at its extreme end, a single-stranded G-rich 3' overhang, referred to as the G-tail. The telomere folds back on itself to form a lariat-shaped loop called the T (for telomere) loop, and the G-tail invades the double stranded DNA of the T-loop to form a D (for displacement) loop. This entire structure is stabilized by interaction with proteins of the shelterin complex, namely TRF1, TRF2, TIN2, RAP1, TPP1 and POT1 [1,2]. The T-loop structure is thought to protect the ends of linear chromosomes from being recognized by the cell as DNA double strand breaks (DSBs) [3]. Paradoxically, numerous proteins known to be involved in the detection and repair of DSBs are also found at telomeres. One such protein is the DNA-dependent protein kinase catalytic subunit, DNA-PKcs, which plays a critical role in the repair of DSBs by non-homologous end-joining in mammalian cells [4,5]. Another is the Werner Syndrome protein, WRN, a multifunctional protein with 3'-5' DNA helicase and 3'-5' exonuclease activities [6]. Both DNA-PKcs and WRN have functions not only in DNA repair and maintenance of genomic stability, but also in the maintenance of telomere integrity. Loss of DNA-PKcs results in telomere uncapping and chromosomal fusions [7], whereas loss of WRN results in telomere shortening and is associated with a premature aging phenotype [6]. One of the current challenges in telomere biology is to understand how these proteins and protein-DNA complexes regulate telomere length, maintain telomere integrity, and prevent the initiation of a DNA damage response and cellular senescence. In this issue of Aging, Kusumoto-Matsuo and colleagues [8] report that DNA-PKcs stimulates the helicase activity of WRN towards model D loop structures in vitro. DNA-PKcs did not affect the exonuclease activity of WRN or the unwinding activity of the related RecQ helicase, BLM, suggesting that this effect is specific for the WRN helicase activity. Significantly, WRN and DNA-PKcs were shown to cooperate to protect the 3' single stranded ends of telomeres in vivo by preventing G-tail shortening. These findings have important implications for how DNA-PKcs and WRN cooperate to resolve these complex telomeric DNA structures. Moreover, since shortening of the G-overhang contributes to onset of cellular senescence [9], these findings suggest that the WRN/DNA-PKcs interaction might contribute to preventing cellular senescence. This study is the first to report a functional interaction between WRN and DNA-PKcs at telomeres and provides a stepping-stone to further elucidate the critical roles that these proteins play in telomere integrity and cellular senescence. It also raises some interesting questions. For example, it will be interesting to determine whether other proteins present at telomeres such as TRF2, which has recently been shown to regulate the activity of WRN [10], affects the regulation of WRN by DNA-PKcs. Equally interesting will be to determine the molecular mechanism by which DNA-PKcs stimulates the helicase activity of WRN and whether the DNA-PKcs binding partner, Ku, plays a role in this process. It will also be interesting to determine whether WRN-mediated unwinding promotes telomerase accessibility to the telomere for example during S-phase. Interestingly, the authors have also shown that DNA-PKcs stimulates the activity of WRN towards D-loops composed of non-telomeric DNA sequences, suggesting that these findings may extend to D-loop structures formed during other nuclear processes such as homologous recombination. In conclusion, these findings bring us one step closer to unraveling the complex interplay between DNA damage response proteins and telomeres and to understanding how these complex and dynamic structures contribute to the maintenance of genomic stability and the prevention of premature aging.
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            Author and article information

            Journal
            Aging (Albany NY)
            ImpactJ
            Aging (Albany NY)
            Impact Journals LLC
            1945-4589
            May 2010
            14 May 2010
            : 2
            : 5
            : 259-260
            Affiliations
            1 Department of Pharmacology and Toxicology, School of Medicine and Biomedical Sciences
            University at Buffalo (SUNY), NY 14214 USA
            2 Institute of Cellular and Molecular Anatomy, Dr. Senckenbergische Anatomie, Goethe University Frankfurt
            Germany
            Author notes
            Correspondence: Oliver Rawashdeh, PhD, Department of Pharmacology and Toxicology (122 Farber Hall), School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), 3435 Main Street, Buffalo NY 14214, USA or6@ 123456buffalo.edu
            Article
            2898014
            20519780
            2c241b5d-9c17-42e9-a088-820caa7f18f0
            Copyright: ©2010 Rawashdeh et al.

            This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

            History
            : 10 May 2010
            : 13 May 2010
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            Commentary

            Cell biology
            kondratova et al. circadian clock proteins control adaptation to novel environment and memory formation. aging. 2010: this issue

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