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      Glycosaminoglycans from Litopenaeus vannamei Inhibit the Alzheimer’s Disease β Secretase, BACE1

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          Abstract

          Only palliative therapeutic options exist for the treatment of Alzheimer’s Disease; no new successful drug candidates have been developed in over 15 years. The widely used clinical anticoagulant heparin has been reported to exert beneficial effects through multiple pathophysiological pathways involved in the aetiology of Alzheimer’s Disease, for example, amyloid peptide production and clearance, tau phosphorylation, inflammation and oxidative stress. Despite the therapeutic potential of heparin as a multi-target drug for Alzheimer’s disease, the repurposing of pharmaceutical heparin is proscribed owing to the potent anticoagulant activity of this drug. Here, a heterogenous non-anticoagulant glycosaminoglycan extract, obtained from the shrimp Litopenaeus vannamei, was found to inhibit the key neuronal β-secretase, BACE1, displaying a more favorable therapeutic ratio compared to pharmaceutical heparin when anticoagulant activity is considered.

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          Most cited references57

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          Alzheimer's disease.

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            The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability.

            Differential scanning fluorimetry (DSF) is a rapid and inexpensive screening method to identify low-molecular-weight ligands that bind and stabilize purified proteins. The temperature at which a protein unfolds is measured by an increase in the fluorescence of a dye with affinity for hydrophobic parts of the protein, which are exposed as the protein unfolds. A simple fitting procedure allows quick calculation of the transition midpoint; the difference in the temperature of this midpoint in the presence and absence of ligand is related to the binding affinity of the small molecule, which can be a low-molecular-weight compound, a peptide or a nucleic acid. DSF is best performed using a conventional real-time PCR instrument. Ligand solutions from a storage plate are added to a solution of protein and dye, distributed into the wells of the PCR plate and fluorescence intensity measured as the temperature is raised gradually. Results can be obtained in a single day.
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              Accurate secondary structure prediction and fold recognition for circular dichroism spectroscopy.

              Circular dichroism (CD) spectroscopy is a widely used technique for the study of protein structure. Numerous algorithms have been developed for the estimation of the secondary structure composition from the CD spectra. These methods often fail to provide acceptable results on α/β-mixed or β-structure-rich proteins. The problem arises from the spectral diversity of β-structures, which has hitherto been considered as an intrinsic limitation of the technique. The predictions are less reliable for proteins of unusual β-structures such as membrane proteins, protein aggregates, and amyloid fibrils. Here, we show that the parallel/antiparallel orientation and the twisting of the β-sheets account for the observed spectral diversity. We have developed a method called β-structure selection (BeStSel) for the secondary structure estimation that takes into account the twist of β-structures. This method can reliably distinguish parallel and antiparallel β-sheets and accurately estimates the secondary structure for a broad range of proteins. Moreover, the secondary structure components applied by the method are characteristic to the protein fold, and thus the fold can be predicted to the level of topology in the CATH classification from a single CD spectrum. By constructing a web server, we offer a general tool for a quick and reliable structure analysis using conventional CD or synchrotron radiation CD (SRCD) spectroscopy for the protein science research community. The method is especially useful when X-ray or NMR techniques fail. Using BeStSel on data collected by SRCD spectroscopy, we investigated the structure of amyloid fibrils of various disease-related proteins and peptides.
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                Author and article information

                Contributors
                Role: Academic Editor
                Role: Academic Editor
                Journal
                Mar Drugs
                Mar Drugs
                marinedrugs
                Marine Drugs
                MDPI
                1660-3397
                03 April 2021
                April 2021
                : 19
                : 4
                : 203
                Affiliations
                [1 ]Molecular & Structural Biosciences, School of Life Sciences, Keele University, Huxley Building, Keele, Staffordshire ST5 5BG, UK; c.j.mycroft-west@ 123456keele.ac.uk (C.J.M.-W.); a.devlin1@ 123456keele.ac.uk (A.J.D.); l.c.cooper@ 123456keele.ac.uk (L.C.C.); p.procter@ 123456keele.ac.uk (P.P.); m.andrade.de.lima@ 123456keele.ac.uk (M.A.L.)
                [2 ]School of Medicine, Keele University, Huxley Building, Keele, Staffordshire ST5 5BG, UK; s.e.guimond@ 123456keele.ac.uk
                [3 ]Istituto di Ricerche Chimiche e Biochimiche G. Ronzoni, via G. Colombo 81, 20133 Milan, Italy; guerrini@ 123456ronzoni.it
                [4 ]School of Chemistry, Keele University, Huxley Building, Keele, Staffordshire ST5 5BG, UK; g.j.miller@ 123456keele.ac.uk
                [5 ]Department of Biochemistry and Systems Biology, ISMIB, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK; dgfernig@ 123456liverpool.ac.uk (D.G.F.); E.A.Yates@ 123456liverpool.ac.uk (E.A.Y.)
                Author notes
                [* ]Correspondence: m.a.skidmore@ 123456keele.ac.uk ; Tel.: +44-(0)1782-733945
                Author information
                https://orcid.org/0000-0002-5903-418X
                https://orcid.org/0000-0001-6533-3306
                https://orcid.org/0000-0002-0287-5594
                Article
                marinedrugs-19-00203
                10.3390/md19040203
                8067017
                33916819
                2cb70e9d-ce56-4aeb-a2c6-9aac3a58f0d5
                © 2021 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( https://creativecommons.org/licenses/by/4.0/).

                History
                : 28 February 2021
                : 26 March 2021
                Categories
                Article

                Pharmacology & Pharmaceutical medicine
                alzheimer’s disease,amyloid-β,bace1,β-secretase,glycosaminoglycan,chondroitin sulfate,heparin,heparan sulphate,litopenaeus vannamei

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