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      Characterization of Two Novel Variants of the Steroidogenic Acute Regulatory Protein Identified in a Girl with Classic Lipoid Congenital Adrenal Hyperplasia

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          Abstract

          Congenital adrenal hyperplasia (CAH) consists of several autosomal recessive disorders that inhibit steroid biosynthesis. We describe a case report diagnosed with adrenal insufficiency due to low adrenal steroids and adrenocorticotropic hormone excess due to lack of cortisol negative feedback signaling to the pituary gland. Genetic work up revealed two missense variants, p.Thr204Arg and p.Leu260Arg in the STAR gene, inherited by both parents (non-consanguineous). The StAR protein supports CYP11A1 enzyme to cleave the side chain of cholesterol and synthesize pregnenolone which is metabolized to all steroid hormones. We used bioinformatics to predict the impact of the variants on StAR activity and then we performed functional tests to characterize the two novel variants. In a cell system we tested the ability of variants to support cholesterol conversion to pregnenolone and measured their mRNA and protein expression. For both variants, we observed loss of StAR function, reduced protein expression and categorized them as pathogenic variants according to guidelines of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. These results fit the phenotype of the girl during diagnosis. This study characterizes two novel variants and expands the list of missense variants that cause CAH.

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          Most cited references36

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          SDM: a server for predicting effects of mutations on protein stability

          Abstract Here, we report a webserver for the improved SDM, used for predicting the effects of mutations on protein stability. As a pioneering knowledge-based approach, SDM has been highlighted as the most appropriate method to use in combination with many other approaches. We have updated the environment-specific amino-acid substitution tables based on the current expanded PDB (a 5-fold increase in information), and introduced new residue-conformation and interaction parameters, including packing density and residue depth. The updated server has been extensively tested using a benchmark containing 2690 point mutations from 132 different protein structures. The revised method correlates well against the hypothetical reverse mutations, better than comparable methods built using machine-learning approaches, highlighting the strength of our knowledge-based approach for identifying stabilising mutations. Given a PDB file (a Protein Data Bank file format containing the 3D coordinates of the protein atoms), and a point mutation, the server calculates the stability difference score between the wildtype and mutant protein. The server is available at http://structure.bioc.cam.ac.uk/sdm2
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            Neonatal anthropometric charts: the Italian neonatal study compared with other European studies.

            This was a nationwide prospective study carried out in Italy between 2005 and 2007, involving 34 centers with a neonatal intensive care unit. The study reports the Italian Neonatal Study charts for weight, length, and head circumference of singletons born between 23 and 42 gestational weeks, comparing them with previous Italian data and with the most recent data from European countries. Single live born babies with ultrasound assessment of gestational age within the first trimester, and with both parents of Italian origin. Only fetal hydrops and major congenital anomalies diagnosed at birth were excluded. The reference set consists of 22,087 girls and 23,375 boys. At each gestational age, boys are heavier than girls by about 4%. Later-born neonates are heavier than firstborn neonates by about 3%. The effects of sex and birth order on length and head circumference are milder. No differences were observed between babies born in central-north Italy and southern Italy. A large variability emerged among European neonatal charts, resulting in huge differences in the percentage of Italian Neonatal Study neonates below the 10th centile, which is traditionally used to define small-for-gestational-age babies. In the last 2 decades prominent changes in the distribution of birth weight emerged in Italy and in the rest of Europe, in both term and preterm neonates. The existing European neonatal charts, based on more or less recent data, were found to be inappropriate for Italy. Until an international standard is developed, the use of national updated reference charts is recommended.
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              Role of steroidogenic acute regulatory protein in adrenal and gonadal steroidogenesis.

              Congenital lipoid adrenal hyperplasia is an autosomal recessive disorder that is characterized by impaired synthesis of all adrenal and gonadal steroid hormones. In three unrelated individuals with this disorder, steroidogenic acute regulatory protein, which enhances the mitochondrial conversion of cholesterol into pregnenolone, was mutated and nonfunctional, providing genetic evidence that this protein is indispensable normal adrenal and gonadal steroidogenesis.
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                Author and article information

                Journal
                Int J Mol Sci
                Int J Mol Sci
                ijms
                International Journal of Molecular Sciences
                MDPI
                1422-0067
                27 August 2020
                September 2020
                : 21
                : 17
                : 6185
                Affiliations
                [1 ]Department of Paediatrics, Division of Endocrinology, Diabetology & Metabolism, Bern University Hospital, 3010 Bern, Switzerland; Efstathios.Katharopoulos@ 123456dbmr.unibe.ch (E.K.); amit@ 123456pandeylab.org (A.V.P.); shriddha4@ 123456gmail.com (S.D.)
                [2 ]Department of Biomedical Research, Bern University Hospital and University of Bern, 3010 Bern, Switzerland; michael.groessl@ 123456insel.ch
                [3 ]Graduate School Bern, University of Bern, 3012 Bern, Switzerland
                [4 ]Department of Paediatrics, Istituto Giannina Gaslini, University of Genoa, 16147 Genoa, Italy; natasciadiiorgi@ 123456gaslini.org (N.D.I.); flavianapoli@ 123456gaslini.org (F.N.); giusypattis@ 123456gmail.com (G.P.); lezzimarilea@ 123456gmail.com (M.L.); MohamadMaghnie@ 123456gaslini.org (M.M.)
                [5 ]Department of Neuroscience, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genova, 16147 Genoa, Italy
                [6 ]Department of Clinical and Molecular Genetics and Rare Disease Unit, University Hospital Vall d’Hebron, 08035 Barcelona, Spain; paufernandez@ 123456vhebron.net
                [7 ]Department of Nephrology and Hypertension, Bern University Hospital, 3010 Bern, Switzerland
                [8 ]Growth and Development Research Unit, Vall d’Hebron Research Institute (VHIR), Centre of Biomedical Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, 08035 Barcelona, Spain; nuria.camats@ 123456vhir.org
                Author notes
                Author information
                https://orcid.org/0000-0002-3078-2176
                https://orcid.org/0000-0003-2695-3531
                https://orcid.org/0000-0001-8331-5902
                https://orcid.org/0000-0002-7183-5238
                Article
                ijms-21-06185
                10.3390/ijms21176185
                7504070
                344c418f-832e-4d51-9145-db19fd2e9df3
                © 2020 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 30 July 2020
                : 21 August 2020
                Categories
                Article

                Molecular biology
                adrenal insufficiency,star,steroidogenic acute regulatory protein,lipoid congenital adrenal hyperplasia,rare disease

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