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      Handheld macroscopic Raman spectroscopy imaging instrument for machine-learning-based molecular tissue margins characterization

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          Abstract.

          Significance: Raman spectroscopy has been developed for surgical guidance applications interrogating live tissue during tumor resection procedures to detect molecular contrast consistent with cancer pathophysiological changes. To date, the vibrational spectroscopy systems developed for medical applications include single-point measurement probes and intraoperative microscopes. There is a need to develop systems with larger fields of view (FOVs) for rapid intraoperative cancer margin detection during surgery.

          Aim: We design a handheld macroscopic Raman imaging system for in vivo tissue margin characterization and test its performance in a model system.

          Approach: The system is made of a sterilizable line scanner employing a coherent fiber bundle for relaying excitation light from a 785-nm laser to the tissue. A second coherent fiber bundle is used for hyperspectral detection of the fingerprint Raman signal over an area of 1    cm 2 . Machine learning classifiers were trained and validated on porcine adipose and muscle tissue.

          Results: Porcine adipose versus muscle margin detection was validated ex vivo with an accuracy of 99% over the FOV of 95    mm 2 in 3    min using a support vector machine.

          Conclusions: This system is the first large FOV Raman imaging system designed to be integrated in the workflow of surgical cancer resection. It will be further improved with the aim of discriminating brain cancer in a clinically acceptable timeframe during glioma surgery.

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          Scikit-learn: Machine learning in python

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            Optical properties of biological tissues: a review.

            A review of reported tissue optical properties summarizes the wavelength-dependent behavior of scattering and absorption. Formulae are presented for generating the optical properties of a generic tissue with variable amounts of absorbing chromophores (blood, water, melanin, fat, yellow pigments) and a variable balance between small-scale scatterers and large-scale scatterers in the ultrastructures of cells and tissues.
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              A multivariate analysis of 416 patients with glioblastoma multiforme: prognosis, extent of resection, and survival.

              The extent of tumor resection that should be undertaken in patients with glioblastoma multiforme (GBM) remains controversial. The purpose of this study was to identify significant independent predictors of survival in these patients and to determine whether the extent of resection was associated with increased survival time. The authors retrospectively analyzed 416 consecutive patients with histologically proven GBM who underwent tumor resection at the authors' institution between June 1993 and June 1999. Volumetric data and other tumor characteristics identified on magnetic resonance (MR) imaging were collected prospectively. Five independent predictors of survival were identified: age, Karnofsky Performance Scale (KPS) score, extent of resection, and the degree of necrosis and enhancement on preoperative MR imaging studies. A significant survival advantage was associated with resection of 98% or more of the tumor volume (median survival 13 months, 95% confidence interval [CI] 11.4-14.6 months), compared with 8.8 months (95% CI 7.4-10.2 months; p < 0.0001) for resections of less than 98%. Using an outcome scale ranging from 0 to 5 based on age, KPS score, and tumor necrosis on MR imaging, we observed significantly longer survival in patients with lower scores (1-3) who underwent aggressive resections, and a trend toward slightly longer survival was found in patients with higher scores (4-5). Gross-total tumor resection is associated with longer survival in patients with GBM, especially when other predictive variables are favorable.
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                Author and article information

                Contributors
                Journal
                J Biomed Opt
                J Biomed Opt
                JBOPFO
                JBO
                Journal of Biomedical Optics
                Society of Photo-Optical Instrumentation Engineers
                1083-3668
                1560-2281
                12 February 2021
                February 2021
                12 February 2021
                : 26
                : 2
                : 022911
                Affiliations
                [a ]Polytechnique Montreal , Department of Engineering Physics, Montreal, Quebec, Canada
                [b ]Centre de recherche du Centre Hospitalier de l’Université de Montréal , Montreal, Quebec, Canada
                [c ]Optech , LaSalle, Quebec, Canada
                [d ]McGill University , Montreal Neurological Institute-Hospital, Department of Neurology and Neurosurgery, Montreal, Quebec, Canada
                Author notes
                [* ]Address all correspondence to Frédéric Leblond, frederic.leblond@ 123456polymtl.ca
                Author information
                https://orcid.org/0000-0002-4753-1701
                https://orcid.org/0000-0003-0318-3327
                Article
                JBO-200306SSR 200306SSR
                10.1117/1.JBO.26.2.022911
                7880244
                33580641
                36d7914d-ae4b-4df0-a4bb-5c2536e3ff4a
                © 2021 The Authors

                Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.

                History
                : 18 September 2020
                : 19 January 2021
                Page count
                Figures: 7, Tables: 4, References: 50, Pages: 18
                Funding
                Funded by: Natural Sciences and Engineering Research Council
                Funded by: Collaborative Health Research Program (CIHR)
                Funded by: Institute for Data Valorization (IVADO)
                Funded by: Ministry of Education and Innovation of Quebec (MEI)
                Award ID: PSR-SIIRI 991
                Funded by: Canada First Research Excellence Fund through the TransMedTech Institute
                Funded by: Natural Sciences and Engineering Research Council of Canada (NSERC)
                Award ID: CGS D-534854-2019
                Categories
                Special Series on Artificial Intelligence and Machine Learning in Biomedical Optics
                Paper
                Custom metadata
                Daoust et al.: Handheld macroscopic Raman spectroscopy imaging instrument…

                Biomedical engineering
                raman spectroscopy,imaging systems,macroscopic imaging,machine learning,surgical guidance

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