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      Application of Raman spectroscopy and Machine Learning algorithms for fruit distillates discrimination

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      Scientific Reports
      Nature Publishing Group UK
      Metabolomics, Applied physics

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          Abstract

          Through this pilot study, the association between Raman spectroscopy and Machine Learning algorithms were used for the first time with the purpose of distillates differentiation with respect to trademark, geographical and botanical origin. Two spectral Raman ranges (region I—200–600 cm −1 and region II—1200–1400 cm −1) appeared to have the higher discrimination potential for the investigated distillates. The proposed approach proved to be a very effective one for trademark fingerprint differentiation, a model accuracy of 95.5% being obtained (only one sample was misclassified). A comparable model accuracy (90.9%) was achieved for the geographical discrimination of the fruit spirits which can be considered as a very good one taking into account that this classification was made inside Transylvania region, among neighbouring areas. Because the trademark fingerprint is the prevailing one, the successfully distillate type differentiation, with respect to the fruit variety, was possible to be made only inside of each producing entity.

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          Induction of decision trees

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            Deep learning and artificial intelligence methods for Raman and surface-enhanced Raman scattering

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              Rapid identification of urinary tract infection bacteria using hyperspectral whole-organism fingerprinting and artificial neural networks.

              Three rapid spectroscopic approaches for whole-organism fingerprinting-pyrolysis mass spectrometry (PyMS), Fourier transform infra-red spectroscopy (FT-IR) and dispersive Raman microscopy--were used to analyse a group of 59 clinical bacterial isolates associated with urinary tract infection. Direct visual analysis of these spectra was not possible, highlighting the need to use methods to reduce the dimensionality of these hyperspectral data. The unsupervised methods of discriminant function and hierarchical cluster analyses were employed to group these organisms based on their spectral fingerprints, but none produced wholly satisfactory groupings which were characteristic for each of the five bacterial types. In contrast, for PyMS and FT-IR, the artificial neural network (ANN) approaches exploiting multi-layer perceptrons or radial basis functions could be trained with representative spectra of the five bacterial groups so that isolates from clinical bacteriuria in an independent unseen test set could be correctly identified. Comparable ANNs trained with Raman spectra correctly identified some 80% of the same test set. PyMS and FT-IR have often been exploited within microbial systematics, but these are believed to be the first published data showing the ability of dispersive Raman microscopy to discriminate clinically significant intact bacterial species. These results demonstrate that modern analytical spectroscopies of high intrinsic dimensionality can provide rapid accurate microbial characterization techniques, but only when combined with appropriate chemometrics.
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                Author and article information

                Contributors
                alina.magdas@itim-cj.ro
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                3 December 2020
                3 December 2020
                2020
                : 10
                : 21152
                Affiliations
                GRID grid.435410.7, ISNI 0000 0004 0634 1551, National Institute for Research and Development of Isotopic and Molecular Technologies, ; 67-103 Donat Str., 400293 Cluj-Napoca, Romania
                Article
                78159
                10.1038/s41598-020-78159-8
                7713252
                33273608
                389cb7bb-5843-4a5b-81ad-7d80569ec489
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 15 October 2020
                : 18 November 2020
                Funding
                Funded by: Romanian National Authority for Scientific Research and Innovation (UEFISCDI)
                Award ID: 260 PED-2020
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                © The Author(s) 2020

                Uncategorized
                metabolomics,applied physics
                Uncategorized
                metabolomics, applied physics

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