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      A functional genetic variation of SLC6A2 repressor hsa-miR-579-3p upregulates sympathetic noradrenergic processes of fear and anxiety

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          Abstract

          Increased sympathetic noradrenergic signaling is crucially involved in fear and anxiety as defensive states. MicroRNAs regulate dynamic gene expression during synaptic plasticity and genetic variation of microRNAs modulating noradrenaline transporter gene ( SLC6A2) expression may thus lead to altered central and peripheral processing of fear and anxiety. In silico prediction of microRNA regulation of SLC6A2 was confirmed by luciferase reporter assays and identified hsa-miR-579-3p as a regulating microRNA. The minor (T)-allele of rs2910931 (MAF cases = 0.431, MAF controls = 0.368) upstream of MIR579 was associated with panic disorder in patients ( p allelic = 0.004, n cases = 506, n controls = 506) and with higher trait anxiety in healthy individuals ( p ASI = 0.029, p ACQ = 0.047, n = 3112). Compared to the major (A)-allele, increased promoter activity was observed in luciferase reporter assays in vitro suggesting more effective MIR579 expression and SLC6A2 repression in vivo ( p = 0.041). Healthy individuals carrying at least one (T)-allele showed a brain activation pattern suggesting increased defensive responding and sympathetic noradrenergic activation in midbrain and limbic areas during the extinction of conditioned fear. Panic disorder patients carrying two (T)-alleles showed elevated heart rates in an anxiety-provoking behavioral avoidance test ( F(2, 270) = 5.47, p = 0.005). Fine-tuning of noradrenaline homeostasis by a MIR579 genetic variation modulated central and peripheral sympathetic noradrenergic activation during fear processing and anxiety. This study opens new perspectives on the role of microRNAs in the etiopathogenesis of anxiety disorders, particularly their cardiovascular symptoms and comorbidities.

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          Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs.

          MicroRNAs (miRNAs) are a class of noncoding RNAs that post-transcriptionally regulate gene expression in plants and animals. To investigate the influence of miRNAs on transcript levels, we transfected miRNAs into human cells and used microarrays to examine changes in the messenger RNA profile. Here we show that delivering miR-124 causes the expression profile to shift towards that of brain, the organ in which miR-124 is preferentially expressed, whereas delivering miR-1 shifts the profile towards that of muscle, where miR-1 is preferentially expressed. In each case, about 100 messages were downregulated after 12 h. The 3' untranslated regions of these messages had a significant propensity to pair to the 5' region of the miRNA, as expected if many of these messages are the direct targets of the miRNAs. Our results suggest that metazoan miRNAs can reduce the levels of many of their target transcripts, not just the amount of protein deriving from these transcripts. Moreover, miR-1 and miR-124, and presumably other tissue-specific miRNAs, seem to downregulate a far greater number of targets than previously appreciated, thereby helping to define tissue-specific gene expression in humans.
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            Neurons in medial prefrontal cortex signal memory for fear extinction.

            Conditioned fear responses to a tone previously paired with a shock diminish if the tone is repeatedly presented without the shock, a process known as extinction. Since Pavlov it has been hypothesized that extinction does not erase conditioning, but forms a new memory. Destruction of the ventral medial prefrontal cortex, which consists of infralimbic and prelimbic cortices, blocks recall of fear extinction, indicating that medial prefrontal cortex might store long-term extinction memory. Here we show that infralimbic neurons recorded during fear conditioning and extinction fire to the tone only when rats are recalling extinction on the following day. Rats that froze the least showed the greatest increase in infralimbic tone responses. We also show that conditioned tones paired with brief electrical stimulation of infralimbic cortex elicit low freezing in rats that had not been extinguished. Thus, stimulation resembling extinction-induced infralimbic tone responses is able to simulate extinction memory. We suggest that consolidation of extinction learning potentiates infralimbic activity, which inhibits fear during subsequent encounters with fear stimuli.
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              Prediction of both conserved and nonconserved microRNA targets in animals.

              MicroRNAs (miRNAs) are involved in many diverse biological processes and they may potentially regulate the functions of thousands of genes. However, one major issue in miRNA studies is the lack of bioinformatics programs to accurately predict miRNA targets. Animal miRNAs have limited sequence complementarity to their gene targets, which makes it challenging to build target prediction models with high specificity. Here we present a new miRNA target prediction program based on support vector machines (SVMs) and a large microarray training dataset. By systematically analyzing public microarray data, we have identified statistically significant features that are important to target downregulation. Heterogeneous prediction features have been non-linearly integrated in an SVM machine learning framework for the training of our target prediction model, MirTarget2. About half of the predicted miRNA target sites in human are not conserved in other organisms. Our prediction algorithm has been validated with independent experimental data for its improved performance on predicting a large number of miRNA down-regulated gene targets. All the predicted targets were imported into an online database miRDB, which is freely accessible at http://mirdb.org.
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                Author and article information

                Contributors
                +49-931-201-77010 , hommers_l@ukw.de
                Journal
                Transl Psychiatry
                Transl Psychiatry
                Translational Psychiatry
                Nature Publishing Group UK (London )
                2158-3188
                19 October 2018
                19 October 2018
                2018
                : 8
                : 226
                Affiliations
                [1 ]ISNI 0000 0001 1378 7891, GRID grid.411760.5, Interdisciplinary Center for Clinical Research, , University Hospital of Würzburg, ; Würzburg, Germany
                [2 ]ISNI 0000 0001 1378 7891, GRID grid.411760.5, Center for Mental Health, Department of Psychiatry, Psychosomatics and Psychotherapy, , University Hospital of Würzburg, ; Würzburg, Germany
                [3 ]ISNI 0000 0001 1378 7891, GRID grid.411760.5, Comprehensive Heart Failure Center (CHFC), , University Hospital of Würzburg, ; Würzburg, Germany
                [4 ]GRID grid.5603.0, Department of Biological and Clinical Psychology/Psychotherapy, , University of Greifswald, ; Greifswald, Germany
                [5 ]ISNI 0000 0004 1936 9756, GRID grid.10253.35, Department of Psychiatry and Psychotherapy & Marburg Center for Mind, Brain and Behavior - MCMBB, , Phillips-University Marburg, ; Marburg, Germany
                [6 ]ISNI 0000 0001 1958 8658, GRID grid.8379.5, Institute of Pharmacology and Toxicology, , University of Würzburg, ; Würzburg, Germany
                [7 ]GRID grid.5963.9, Department of Psychiatry and Psychotherapy, Medical Center – University of Freiburg, Faculty of Medicine, , University of Freiburg, ; Freiburg, Germany
                [8 ]ISNI 0000 0001 2218 4662, GRID grid.6363.0, Department of Psychiatry and Psychotherapy, , Charité University Medicine, ; Berlin, Germany
                [9 ]ISNI 0000 0001 0943 599X, GRID grid.5601.2, Department of Psychology, School of Social Sciences, , University of Mannheim, ; Mannheim, Germany
                [10 ]ISNI 0000 0004 0551 4246, GRID grid.16149.3b, Department of Psychiatry, , University Hospital Münster, ; Münster, Germany
                [11 ]ISNI 0000 0001 2248 7639, GRID grid.7468.d, Department of Psychology, , Humboldt-University, ; Berlin, Germany
                [12 ]ISNI 0000 0000 8580 3777, GRID grid.6190.e, Department of Clinical Psychology and Psychotherapy, , University of Cologne, ; Cologne, Germany
                [13 ]ISNI 0000 0004 1937 0642, GRID grid.6612.3, Department of Psychology, , University of Basel, ; Basel, Switzerland
                [14 ]ISNI 0000 0001 2287 2617, GRID grid.9026.d, Department of Clinical Psychology and Psychotherapy, , University of Hamburg, ; Hamburg, Germany
                [15 ]ISNI 0000 0001 2111 7257, GRID grid.4488.0, Institute of Clinical Psychology and Psychotherapy, , Technische Universität Dresden, ; Dresden, Germany
                [16 ]Christoph-Dornier-Foundation for Clinical Psychology, Bremen, Germany
                [17 ]ISNI 0000 0001 1958 8658, GRID grid.8379.5, Center of Mental Health, Department of Biological Psychology, Clinical Psychology, and Psychotherapy, , Julius-Maximilians-Universität Würzburg, ; Würzburg, Germany
                [18 ]ISNI 0000 0004 0551 4246, GRID grid.16149.3b, Department of Clinical Radiology, , University Hospital Münster, ; Münster, Germany
                [19 ]ISNI 0000 0004 0578 8220, GRID grid.411088.4, Department of Psychiatry, Psychosomatic Medicine and Psychotherapy, , University Hospital Frankfurt, ; Frankfurt am Main, Germany
                [20 ]ISNI 0000 0001 1378 7891, GRID grid.411760.5, Center of Mental Health, Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy, , University Hospital of Würzburg, ; Würzburg, Germany
                [21 ]ISNI 0000 0004 1936 973X, GRID grid.5252.0, Clinical Psychology & Psychotherapy RG, Department of Psychiatry & Psychotherapy, , Ludwig Maximilans Universität Munich, ; Munich, Germany
                [22 ]ISNI 0000 0001 1378 7891, GRID grid.411760.5, Department of Internal Medicine I, , University Hospital of Würzburg, ; Würzburg, Germany
                [23 ]ISNI 0000 0001 1014 0849, GRID grid.419491.0, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, ; Berlin, Germany
                Author information
                http://orcid.org/0000-0002-2663-5990
                http://orcid.org/0000-0002-9421-1292
                http://orcid.org/0000-0001-6794-5349
                http://orcid.org/0000-0003-0692-6720
                http://orcid.org/0000-0002-1238-6225
                http://orcid.org/0000-0002-0992-634X
                http://orcid.org/0000-0002-9837-0944
                Article
                278
                10.1038/s41398-018-0278-4
                6195525
                3a9ce8f3-c332-4f37-9b20-1012f9d52c19
                © The Author(s) 2018

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 8 August 2018
                : 9 August 2018
                Funding
                Funded by: Interdisciplinary Center of Clinical Research Würzburg N-258
                Funded by: FundRef https://doi.org/10.13039/501100001659, Deutsche Forschungsgemeinschaft (German Research Foundation);
                Award ID: CRC-TRR-58
                Award ID: CRC-TRR-58
                Award ID: CRC-TRR-58
                Award ID: CRC-TRR-58
                Award ID: CRC-TRR-58
                Award ID: STR 1146/8-1
                Award ID: CRC-TRR-58
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100002347, Bundesministerium für Bildung und Forschung (Federal Ministry of Education and Research);
                Award ID: 01GV0615
                Award ID: 01GV0614
                Award ID: 01GV0615
                Award ID: 01GV0614
                Award ID: 01GV0615
                Award ID: 01GV0615
                Award ID: 01GV0615
                Award ID: 01GV0614
                Award ID: 01GV0614
                Award ID: 01GV0614
                Award ID: 01GV0615
                Award ID: 01GV0614
                Award ID: 01GV0614
                Award ID: 01GV0615
                Award ID: 01GV0614
                Award ID: 01GV0615
                Award ID: 01GV0614
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                © The Author(s) 2018

                Clinical Psychology & Psychiatry
                Clinical Psychology & Psychiatry

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