Contributors
Ting-Hsuan Wu: Role: ConceptualizationRole: Formal analysisRole: InvestigationRole: SoftwareRole:
Writing – original draftRole: Writing – review & editing
Lingfang Shi: Role: InvestigationRole: MethodologyRole: Writing – review & editing
Jessika Adrian: Role: Data curationRole: InvestigationRole: MethodologyRole: Project administrationRole:
Resources
Minyi Shi: Role: InvestigationRole: MethodologyRole: Resources
Ramesh V. Nair: Role: Data curationRole: Formal analysisRole: MethodologyRole: SoftwareRole: ValidationRole:
Writing – review & editing
Michael P. Snyder: Role: Funding acquisitionRole: Project administrationRole: ResourcesRole: Supervision
Peter N. Kao:
ORCID: http://orcid.org/0000-0003-2968-5456
Role: ConceptualizationRole: Funding acquisitionRole: InvestigationRole: MethodologyRole:
Project administrationRole: SupervisionRole: Writing – original draftRole: Writing
– review & editing
Deyou Zheng: Role: Editor
Journal
Journal ID (nlm-ta): PLoS One
Journal ID (iso-abbrev): PLoS ONE
Journal ID (publisher-id): plos
Journal ID (pmc): plosone
Title:
PLoS ONE
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Electronic):
1932-6203
Publication date
(Electronic):
28
March
2018
Publication date Collection: 2018
Volume: 13
Issue: 3
Electronic Location Identifier: e0193126
Affiliations
[1
]
Pulmonary and Critical Care Medicine, Stanford University School of Medicine, Stanford,
California, United States of America
[2
]
Biomedical Informatics, Stanford University School of Medicine, Stanford, California,
United States of America
[3
]
Department of Genetics, Stanford University School of Medicine, Stanford, California,
United States of America
[4
]
Stanford Center for Genomics and Personalized Medicine, Stanford University School
of Medicine, Palo Alto, California, United States of America
Yeshiva University Albert Einstein College of Medicine, UNITED STATES
Author notes
Competing Interests: The authors have declared that no competing interests exist.
Author information
Article
Publisher ID:
PONE-D-17-39381
DOI: 10.1371/journal.pone.0193126
PMC ID: 5873942
PubMed ID: 29590119
SO-VID: 3c95e7dc-2f3a-4e9f-a1fa-b082398eace0
Copyright © © 2018 Wu et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
History
Date
received
: 6
November
2017
Date
accepted
: 5
February
2018
Page count
Figures: 6,
Tables: 2,
Pages: 21
Funding
Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
Award ID: 1 R01 AI39624
Award Recipient
:
ORCID: http://orcid.org/0000-0003-2968-5456
Peter N. Kao
Funded by: funder-id http://dx.doi.org/10.13039/100000002, National Institutes of Health;
Award ID: U54HG006996
Award Recipient
:
Michael P. Snyder
This study was supported by the National Institutes of Health; R01 AI39624 provided
support for PNK and LF; and U54 HG006996 provided support for JA, MS, RVN and MPS.
The funders had no role in study design, data collection and analysis, decision to
publish, or preparation of the manuscript.
Categories
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Cell Biology
Subject:
Chromosome Biology
Subject:
Chromatin
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Epigenetics
Subject:
Chromatin
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Chromatin
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Gene Regulation
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Gene Regulation
Subject:
Transcriptional Control
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Biology and life sciences
Subject:
Biochemistry
Subject:
Proteins
Subject:
DNA-binding proteins
Subject:
Transcription Factors
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Gene Expression
Subject:
Gene Regulation
Subject:
Transcription Factors
Subject:
Biology and Life Sciences
Subject:
Biochemistry
Subject:
Proteins
Subject:
Regulatory Proteins
Subject:
Transcription Factors
Subject:
Biology and life sciences
Subject:
Genetics
Subject:
Gene expression
Subject:
DNA transcription
Subject:
Research and Analysis Methods
Subject:
Database and Informatics Methods
Subject:
Bioinformatics
Subject:
Sequence Analysis
Subject:
Sequence Motif Analysis
Subject:
Biology and life sciences
Subject:
Computational biology
Subject:
Genome complexity
Subject:
Non-coding RNA sequences
Subject:
Biology and life sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Genome complexity
Subject:
Non-coding RNA sequences
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