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      Incorporation of Amino Acids with Long-Chain Terminal Olefins into Proteins

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          Abstract

          The increasing need for site-specific protein decorations that mimic natural posttranslational modifications requires access to a variety of noncanonical amino acids with moieties enabling bioorthogonal conjugation chemistry. Here we present the incorporation of long-chain olefinic amino acids into model proteins with rational variants of pyrrolysyl-tRNA synthetase (PylRS). N ε-heptenoyl lysine was incorporated for the first time using the known promiscuous variant PylRS(Y306A/Y384F), and N ε-pentenoyl lysine was incorporated in significant yields with the novel variant PylRS(C348A/Y384F). This is the only example of rational modification at position C348 to enlarge the enzyme’s binding pocket. Furthermore, we demonstrate the feasibility of our chosen amino acids in the thiol-ene conjugation reaction with a thiolated polysaccharide.

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          Most cited references33

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          Adding new chemistries to the genetic code.

          The development of new orthogonal aminoacyl-tRNA synthetase/tRNA pairs has led to the addition of approximately 70 unnatural amino acids (UAAs) to the genetic codes of Escherichia coli, yeast, and mammalian cells. These UAAs represent a wide range of structures and functions not found in the canonical 20 amino acids and thus provide new opportunities to generate proteins with enhanced or novel properties and probes of protein structure and function.
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            Advances in chemical protein modification.

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              Designing logical codon reassignment – Expanding the chemistry in biology† †Electronic supplementary information (ESI) available: A comprehensive table of the UAAs incorporated to date (also summarized in Table 1), their reported/potential uses, and the required mutations in the aaRS to allow their uses. See DOI: 10.1039/c4sc01534g Click here for additional data file.

              This review rationalizes the varied designs of systems for incorporation of UAAs into proteins via canonical codons.

                Author and article information

                Contributors
                Role: Academic Editor
                Role: Academic Editor
                Journal
                Molecules
                Molecules
                molecules
                Molecules
                MDPI
                1420-3049
                29 February 2016
                March 2016
                : 21
                : 3
                : 287
                Affiliations
                [1 ]Institute of Chemistry, Technische Universität Berlin, Mueller-Breslau-Strasse 10, 10623 Berlin, Germany; m.p.exner@ 123456gmx.net (M.P.E.); zheni.ivanova@ 123456gmail.com (Z.I.P.)
                [2 ]Institute of Pharmacy, Freie Universität Berlin, Königin-Luise-Str. 2+4, 14195 Berlin, Germany; koehling@ 123456zedat.fu-berlin.de (S.K.); joerg.rademann@ 123456fu-berlin.de (J.R.)
                [3 ]Service de Chimie Bioorganique et de Marquage, iBiTecS, CEA, 91191 Gif-sur-Yvette, France; julie.rivollier@ 123456cea.fr (J.R.); sgosling@ 123456isthmus.fr (S.G.); marie-pierre.heck@ 123456cea.fr (M.-P.H.)
                [4 ]Medicinal Chemistry, Rega Institute for Medical Research, KU Leuven, Minderbroedersstraat 10, 3000 Leuven, Belgium; puneet.srivastava@ 123456rega.kuleuven.be (P.S.); piet.herdewijn@ 123456rega.kuleuven.be (P.H.)
                Author notes
                [* ] Correspondence: budisa@ 123456biocat.tu-berlin.de ; Tel.: +49-30-314-28960
                Article
                molecules-21-00287
                10.3390/molecules21030287
                6272937
                26938510
                416a8a0d-19a2-47ab-8230-97e11382edff
                © 2016 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 16 January 2016
                : 25 February 2016
                Categories
                Article

                stop codon suppression,protein decoration,noncanonical amino acid,pyrrolysyl-trna synthetase,thiol-ene coupling,metathesis

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