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      Support Vector Machine for Analyzing Contributions of Brain Regions During Task-State fMRI

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          Abstract

          The mainstream method used for the analysis of task functional Magnetic Resonance Imaging (fMRI) data, is to obtain task-related active brain regions based on generalized linear models. Machine learning as a data-driven technical method is increasingly used in fMRI data analysis. The language task data, including math task and story task, of the Human Connectome Project (HCP) was used in this work. We chose a linear support vector machine as a classifier to classify math and story tasks and compared them with the activated brain regions of a SPM statistical analysis. As a result, 13 of the 25 regions used for classification in SVM were activated regions, and 12 were non-activated regions. In particular, the right Paracentral Lobule and right Rolandic Operculum which belong to non-activated regions, contributed most to the classification. Therefore, the differences found in machine learning can provide a new understanding of the physiological mechanisms of brain regions under different tasks.

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          Most cited references30

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          Distributed and overlapping representations of faces and objects in ventral temporal cortex.

          The functional architecture of the object vision pathway in the human brain was investigated using functional magnetic resonance imaging to measure patterns of response in ventral temporal cortex while subjects viewed faces, cats, five categories of man-made objects, and nonsense pictures. A distinct pattern of response was found for each stimulus category. The distinctiveness of the response to a given category was not due simply to the regions that responded maximally to that category, because the category being viewed also could be identified on the basis of the pattern of response when those regions were excluded from the analysis. Patterns of response that discriminated among all categories were found even within cortical regions that responded maximally to only one category. These results indicate that the representations of faces and objects in ventral temporal cortex are widely distributed and overlapping.
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            Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI.

            Parallel imaging in the form of multiband radiofrequency excitation, together with reduced k-space coverage in the phase-encode direction, was applied to human gradient echo functional MRI at 7 T for increased volumetric coverage and concurrent high spatial and temporal resolution. Echo planar imaging with simultaneous acquisition of four coronal slices separated by 44mm and simultaneous 4-fold phase-encoding undersampling, resulting in 16-fold acceleration and up to 16-fold maximal aliasing, was investigated. Task/stimulus-induced signal changes and temporal signal behavior under basal conditions were comparable for multiband and standard single-band excitation and longer pulse repetition times. Robust, whole-brain functional mapping at 7 T, with 2 x 2 x 2mm(3) (pulse repetition time 1.25 sec) and 1 x 1 x 2mm(3) (pulse repetition time 1.5 sec) resolutions, covering fields of view of 256 x 256 x 176 mm(3) and 192 x 172 x 176 mm(3), respectively, was demonstrated with current gradient performance. (c) 2010 Wiley-Liss, Inc.
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              When the brain loses its self: prefrontal inactivation during sensorimotor processing.

              A common theme in theories of subjective awareness poses a self-related "observer" function, or a homunculus, as a critical element without which awareness can not emerge. Here, we examined this question using fMRI. In our study, we compared brain activity patterns produced by a demanding sensory categorization paradigm to those engaged during self-reflective introspection, using similar sensory stimuli. Our results show a complete segregation between the two patterns of activity. Furthermore, regions that showed enhanced activity during introspection underwent a robust inhibition during the demanding perceptual task. The results support the notion that self-related processes are not necessarily engaged during sensory perception and can be actually suppressed.
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                Author and article information

                Contributors
                Journal
                Front Neuroinform
                Front Neuroinform
                Front. Neuroinform.
                Frontiers in Neuroinformatics
                Frontiers Media S.A.
                1662-5196
                06 March 2019
                2019
                : 13
                : 10
                Affiliations
                [1] 1Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, School of Biomedical Engineering, Capital Medical University , Beijing, China
                [2] 2Beijing Stomatological Hospital, Capital Medical University , Beijing, China
                [3] 3Beijing Institute of Technology , Beijing, China
                Author notes

                Edited by: Tianyi Yan, Beijing Institute of Technology, China

                Reviewed by: Bin Wang, Taiyuan University of Technology, China; Takahashi Satoshi, Okayama University, Japan

                *Correspondence: Xia Li, xiali@ 123456ccmu.edu.cn Renji Chen, chenrenji@ 123456126.com

                These authors have contributed equally to this work

                Article
                10.3389/fninf.2019.00010
                6414418
                30894812
                475c94a1-51ee-40ff-8dc4-0e166ce99971
                Copyright © 2019 Wang, Li, Zhang, Wang, Feng, Liang, Wei, Zhang, Li and Chen.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 15 November 2018
                : 12 February 2019
                Page count
                Figures: 6, Tables: 2, Equations: 0, References: 49, Pages: 12, Words: 0
                Funding
                Funded by: National Natural Science Foundation of China 10.13039/501100001809
                Award ID: 61473043
                Award ID: 61727807
                Award ID: 81771909
                Award ID: 81671776
                Award ID: 61633018
                Funded by: Beijing Municipal Science and Technology Commission 10.13039/501100009592
                Award ID: Z161100002616020
                Award ID: Z131100006813022
                Award ID: PXM2017_026283_000002
                Categories
                Neuroscience
                Original Research

                Neurosciences
                generalized linear models,support vector machine,contribution of brain region,task fmri,lasso regression

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