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      Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced Hsp90 Levels

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          Abstract

          The molecular chaperone HSP90 aids the maturation of a diverse but select set of metastable protein clients, many of which are key to a variety of signal transduction pathways. HSP90 function has been best investigated in animal and fungal systems, where inhibition of the chaperone has exceptionally diverse effects, ranging from reversing oncogenic transformation to preventing the acquisition of drug resistance. Inhibition of HSP90 in the model plant Arabidopsis thaliana uncovers novel morphologies dependent on normally cryptic genetic variation and increases stochastic variation inherent to developmental processes. The biochemical activity of HSP90 is strictly conserved between animals and plants. However, the substrates and pathways dependent on HSP90 in plants are poorly understood. Progress has been impeded by the necessity of reliance on light-sensitive HSP90 inhibitors due to redundancy in the A. thaliana HSP90 gene family. Here we present phenotypic and genome-wide expression analyses of A. thaliana with constitutively reduced HSP90 levels achieved by RNAi targeting. HSP90 reduction affects a variety of quantitative life-history traits, including flowering time and total seed set, increases morphological diversity, and decreases the developmental stability of repeated characters. Several morphologies are synergistically affected by HSP90 and growth temperature. Genome-wide expression analyses also suggest a central role for HSP90 in the genesis and maintenance of plastic responses. The expression results are substantiated by examination of the response of HSP90-reduced plants to attack by caterpillars of the generalist herbivore Trichoplusia ni. HSP90 reduction potentiates a more robust herbivore defense response. In sum, we propose that HSP90 exerts global effects on the environmental responsiveness of plants to many different stimuli. The comprehensive set of HSP90-reduced lines described here is a vital instrument to further examine the role of HSP90 as a central interface between organism, development, and environment.

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          Most cited references43

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          Gene Ontology: tool for the unification of biology

          Genomic sequencing has made it clear that a large fraction of the genes specifying the core biological functions are shared by all eukaryotes. Knowledge of the biological role of such shared proteins in one organism can often be transferred to other organisms. The goal of the Gene Ontology Consortium is to produce a dynamic, controlled vocabulary that can be applied to all eukaryotes even as knowledge of gene and protein roles in cells is accumulating and changing. To this end, three independent ontologies accessible on the World-Wide Web (http://www.geneontology.org) are being constructed: biological process, molecular function and cellular component.
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            Over 225,000 independent Agrobacterium transferred DNA (T-DNA) insertion events in the genome of the reference plant Arabidopsis thaliana have been created that represent near saturation of the gene space. The precise locations were determined for more than 88,000 T-DNA insertions, which resulted in the identification of mutations in more than 21,700 of the approximately 29,454 predicted Arabidopsis genes. Genome-wide analysis of the distribution of integration events revealed the existence of a large integration site bias at both the chromosome and gene levels. Insertion mutations were identified in genes that are regulated in response to the plant hormone ethylene.
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              The water culture method of growing plants without soil

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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                PLoS ONE
                plos
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2007
                25 July 2007
                : 2
                : 7
                : e648
                Affiliations
                [1 ]Committee on Genetics, University of Chicago, Chicago, Illinois, United States of America
                [2 ]Whitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America
                [3 ]Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America
                [4 ]FAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts, United States of America
                [5 ]Informatics Program, Children's Hospital Boston, Boston, Massachusetts, United States of America
                University of Chicago, United States of America
                Author notes
                * To whom correspondence should be addressed. E-mail: queitsch@ 123456u.washington.edu

                Conceived and designed the experiments: CQ AB TS AW EW. Performed the experiments: CQ AB TS AW EW KS CM AK. Analyzed the data: CQ SK AB TS AW EW CM. Wrote the paper: CQ SL TS.

                [¤a]

                Current address: Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, United States of America,

                [¤b]

                Current address: Whitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America,

                [¤c]

                Current address: Plants, Soils, and Biometeorology Department, Utah State University, Logan, Utah, United States of America,

                [¤d]

                Current address: Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America

                Article
                07-PONE-RA-01328
                10.1371/journal.pone.0000648
                1920555
                17653275
                4955c415-f85c-47b8-b4e4-d601eacbb385
                Sangster et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 18 May 2007
                : 11 June 2007
                Page count
                Pages: 15
                Categories
                Research Article
                Plant Biology/Plant Genetics and Gene Expression
                Plant Biology/Plant Growth and Development
                Plant Biology/Plant-Biotic Interactions
                Plant Biology/Plant-Environment Interactions

                Uncategorized
                Uncategorized

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