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      15N and 13C-SOFAST-HMQC editing enhances 3D-NOESY sensitivity in highly deuterated, selectively [ 1H, 13C]-labeled proteins

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          Abstract

          The ongoing NMR method development effort strives for high quality multidimensional data with reduced collection time. Here, we apply ‘SOFAST-HMQC’ to frequency editing in 3D HMQC-NOESY-HMQC and demonstrate the sensitivity benefits using highly deuterated and 15N, methyl labeled samples in H 2O. The experiments benefit from a combination of selective T 1 relaxation (or L-optimized effect), from Ernst angle optimization and, in certain types of experiments, from using the mixing time for both NOE buildup and magnetization recovery. This effect enhances sensitivity by up to 2.4× at fast pulsing versus reference HMQC sequences of same overall length and water suppression characteristics. Representative experiments designed to address interesting protein NMR challenges are detailed. Editing capabilities are exploited with heteronuclear 15N, 13C-edited, or with diagonal-free 13C aromatic/methyl-resolved 3D-SOFAST-HMQC-NOESY-HMQC. The latter experiment is used here to elucidate the methyl-aromatic NOE network in the hydrophobic core of the 19kDa FliT-FliJ flagellar protein complex. Incorporation of fast pulsing to reference experiments such as 3D-NOESY-HMQC boosts digital resolution, simplifies the process of NOE assignment and helps to automate protein structure determination.

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          Author and article information

          Journal
          9110829
          2209
          J Biomol NMR
          J. Biomol. NMR
          Journal of biomolecular NMR
          0925-2738
          1573-5001
          25 November 2016
          23 November 2016
          December 2016
          01 December 2017
          : 66
          : 4
          : 259-271
          Affiliations
          Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455
          Author notes
          [†]

          Authors that contributed equally to this work.

          Article
          PMC5218894 PMC5218894 5218894 nihpa832071
          10.1007/s10858-016-0074-5
          5218894
          27878649
          4aa9084c-36e5-4a2e-926e-e15e0d6940d2
          History
          Categories
          Article

          NOESY,SOFAST,SOFAST-NOESY,fast pulsing data collection,liquid state NMR

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