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      Management, morphological and genetic diversity of domesticated agaves in Michoacán, México

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          Abstract

          Background

          Pulque is a fermented beverage prepared with sap of Agave species in Mexico. Management of agaves for this purpose has motivated domestication of some species and high phenotypic variation that commonly causes uncertainty about the taxonomic identity of varieties traditionally managed by people. This study assumed that varieties of crop species continually arise from mutations, sexual reproduction and hybridization, among other processes, and some of them are favoured and maintained by humans. Identifying these varieties may be difficult and a challenging issue for botanists and evolutionary biologists studying processes of domestication. Through a case study, we analysed the traditional varieties of agaves used to produce pulque in Michoacán, Mexico. We aimed at identifying the varieties, analysing the relatedness among them and developing a methodological approach that could help solve taxonomic problems and study variation under domestication of this and other plant groups. We documented (1) the traditional varieties of agave used and their identity, (2) how these varieties are perceived, used and managed by the local people and (3) how management influences phenotypic and genetic variation among varieties.

          Methods

          We interviewed pulque producers in two localities of the state of Michoacán, Mexico, where we recorded management practices of agaves, the traditional varieties used, the attributes characterizing those varieties, the varieties preferred by people, and features and mechanisms of selection. We conducted multivariate analyses of morphological features of the agave varieties, as well as genetic diversity and genetic distance studies among agave varieties through 11 nuclear microsatellites.

          Results

          Seven traditional varieties of Agave were recorded in the study area. Multivariate analyses of morphology identified varieties belonging to the species A. salmiana, A. mapisaga and, presumably, A. americana. The preferred varieties have morphological features selected to make easier their management and produce higher sap yields. Genetic diversities ( H E = 0. 470 to 0.594) were high compared with other Agave species with similar life history traits and use. Genetic distance analyses grouped the varieties “Verde” and “Negro” (identified as A. salmiana), whereas the varieties “Tarímbaro” and “Listoncillo” (identified as A. mapisaga) formed another group. The varieties “Blanco” and “Carrizaleño” (most probably being A. americana) clustered with varieties of A. salmiana, whereas the variety “Cenizo” appeared as a distinct group . Bayesian analysis indicated that most individuals of varieties of A. salmiana form a group and those of the varieties of A. mapisaga form another, whereas individuals of the varieties putatively belonging to A. americana clustered in similar proportions with both groups.

          Conclusions

          The traditional pulque production in the study area is an ongoing practice. It is still an important source of products for direct consumption by households and generation of economic incomes and as part of the cultural identity of local people. The most used traditional variety exhibited a marked gigantism, and although these agaves are mainly asexually propagated, populations have high genetic diversity. The local producers promote the maintenance of different traditional varieties. Our study shows the value of an integral research approach including ethnobiological, morphological and genetic information to clarify the state of variation influenced by humans on agaves, but it would be helpful to study other organisms under domestication. In addition, such approach would help to document human and non-human mechanisms generating crop varieties managed by local people.

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          Most cited references69

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          Estimation of average heterozygosity and genetic distance from a small number of individuals.

          M Nei (1978)
          The magnitudes of the systematic biases involved in sample heterozygosity and sample genetic distances are evaluated, and formulae for obtaining unbiased estimates of average heterozygosity and genetic distance are developed. It is also shown that the number of individuals to be used for estimating average heterozygosity can be very small if a large number of loci are studied and the average heterozygosity is low. The number of individuals to be used for estimating genetic distance can also be very small if the genetic distance is large and the average heterozygosity of the two species compared is low.
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            The agroecological revolution in Latin America: rescuing nature, ensuring food sovereignty and empowering peasants

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              Domestication of Plants in the Americas: Insights from Mendelian and Molecular Genetics

              Background Plant domestication occurred independently in four different regions of the Americas. In general, different species were domesticated in each area, though a few species were domesticated independently in more than one area. The changes resulting from human selection conform to the familiar domestication syndrome, though different traits making up this syndrome, for example loss of dispersal, are achieved by different routes in crops belonging to different families. Genetic and Molecular Analyses of Domestication Understanding of the genetic control of elements of the domestication syndrome is improving as a result of the development of saturated linkage maps for major crops, identification and mapping of quantitative trait loci, cloning and sequencing of genes or parts of genes, and discoveries of widespread orthologies in genes and linkage groups within and between families. As the modes of action of the genes involved in domestication and the metabolic pathways leading to particular phenotypes become better understood, it should be possible to determine whether similar phenotypes have similar underlying genetic controls, or whether human selection in genetically related but independently domesticated taxa has fixed different mutants with similar phenotypic effects. Conclusions Such studies will permit more critical analysis of possible examples of multiple domestications and of the origin(s) and spread of distinctive variants within crops. They also offer the possibility of improving existing crops, not only major food staples but also minor crops that are potential export crops for developing countries or alternative crops for marginal areas.
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                Author and article information

                Contributors
                figueredocj@gmail.com
                Journal
                J Ethnobiol Ethnomed
                J Ethnobiol Ethnomed
                Journal of Ethnobiology and Ethnomedicine
                BioMed Central (London )
                1746-4269
                16 January 2020
                16 January 2020
                2020
                : 16
                : 3
                Affiliations
                [1 ]ISNI 0000 0001 2159 0001, GRID grid.9486.3, Instituto de Investigaciones en Ecosistemas y Sustentabilidad, , Universidad Nacional Autónoma de México, ; Morelia, Michoacán México
                [2 ]ISNI 0000 0004 5988 7021, GRID grid.484694.3, Departamento de Ingeniería Bioquímica, , Tecnológico Nacional de México, ; Morelia, Michoacán México
                [3 ]ISNI 0000 0001 2219 2996, GRID grid.412866.f, Cátedras CONACYT-Laboratorio de Genética, Área Académica de Biología, Instituto de Ciencias Básicas e Ingeniería, , Universidad Autónoma del Estado de Hidalgo, ; Mineral de la Reforma, Hidalgo México
                Author information
                http://orcid.org/0000-0003-0906-8821
                Article
                353
                10.1186/s13002-020-0353-9
                6966820
                31948439
                4b2823cb-82a2-4d32-8a4c-84da2330ee46
                © The Author(s). 2020

                Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 21 September 2019
                : 2 January 2020
                Funding
                Funded by: CONACYT
                Award ID: A1-S-14306
                Award ID: 778409
                Award Recipient :
                Funded by: PAPIIT
                Award ID: IN206217
                Award Recipient :
                Categories
                Research
                Custom metadata
                © The Author(s) 2020

                Health & Social care
                domestication,fermented beverages,mesoamerica,pulque agaves,traditional knowledge

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