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      Rapid process synthesis supported by a unified modular software framework

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          Abstract

          Although known to be very powerful, the widespread application of model‐based techniques is still significantly hampered in the area of bio‐processes. Reasons for this situation can be found along the whole chain to set up and implement such approaches. In a time‐consuming step, models are typically hand‐crafted. Whether alternatives of better models exist to actually fulfill the final goals is undocumented, most often even unknown. In a next step, model‐based process control methods are hand‐coded in an error‐prone procedure. For many of these methods given in the literature, only simulation studies are shown, leaving the interested reader with the unanswered question whether the implementation of a specific method in a real process is viable. As the potentially time‐consuming implementation of such a method presents a risk for a rapid process development, promising candidates may be overlooked. To remediate this unsatisfactory situation, a combination of theoretical methods and information technology is proposed here. By an exemplarily realized software tool, it is shown how such an environment helps to promote model‐based optimization, supervision, and control of bio‐processes and allows for an inexpensive test of new ideas as well in real‐life experiments. The contribution concentrates on an overview of a possible software architecture with respect to necessary methods and a meaningful information strategy, highlighting some of the more crucial building blocks. Experimental results exploiting parts of the proposed methods are given for a yeast strain synthesizing a product of industrial interest.

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          Author and article information

          Contributors
          rudibert.king@tu-berlin.de
          Journal
          Eng Life Sci
          Eng. Life Sci
          10.1002/(ISSN)1618-2863
          ELSC
          Engineering in Life Sciences
          John Wiley and Sons Inc. (Hoboken )
          1618-0240
          1618-2863
          08 February 2017
          November 2017
          : 17
          : 11 , Effective Bioprocess Development ( doiID: 10.1002/elsc.v17.11 )
          : 1202-1214
          Affiliations
          [ 1 ] Chair of Measurement and Control Technische Universität Berlin Berlin Germany
          [ 2 ] Department Experimental Toxicology and ZEBET Federal Institute for Risk Assessment Berlin Germany
          Author notes
          [*] [* ] Correspondence: Prof. Rudibert King ( rudibert.king@ 123456tu-berlin.de ), Chair of Measurement and Control, Secr. ER 2‐1, Technische Universität Berlin, Hardenbergstr. 36a, 10623 Berlin, Germany
          Article
          PMC6999271 PMC6999271 6999271 ELSC987
          10.1002/elsc.201600020
          6999271
          32624748
          4be3849b-ba47-41ee-b928-b75feb649ccf
          © 2017 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim
          History
          : 10 March 2016
          : 12 October 2016
          : 05 January 2017
          Page count
          Figures: 5, Tables: 5, Pages: 13, Words: 8266
          Funding
          Funded by: Federal Ministry of Education and Research , open-funder-registry 10.13039/501100002347;
          Award ID: 02PJ1150
          Categories
          Research Article
          Research Articles
          Custom metadata
          2.0
          November 2017
          Converter:WILEY_ML3GV2_TO_JATSPMC version:5.7.5 mode:remove_FC converted:21.01.2020

          Process design,Modeling,Modeling software,State estimation,Trajectory planning

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