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      Genetic and functional diversification of chemosensory pathway receptors in mosquito-borne filarial nematodes

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          Abstract

          Lymphatic filariasis (LF) afflicts over 60 million people worldwide and leads to severe pathological outcomes in chronic cases. The nematode parasites (Nematoda: Filarioidea) that cause LF require both arthropod (mosquito) intermediate hosts and mammalian definitive hosts for their propagation. The invasion and migration of filarial worms through host tissues are complex and critical to survival, yet little is known about the receptors and signaling pathways that mediate directed migration in these medically important species. In order to better understand the role of chemosensory signaling in filarial worm taxis, we employ comparative genomics, transcriptomics, reverse genetics, and chemical approaches to identify putative chemosensory receptor proteins and perturb chemotaxis phenotypes in filarial worms. We find that chemoreceptor family size is correlated with the presence of environmental (extrahost) stages in nematode life cycles, and that filarial worms contain compact and highly diverged chemoreceptor complements and lineage-specific ion channels that are predicted to operate downstream of chemoreceptor activation. In Brugia malayi, an etiological agent of LF, chemoreceptor expression patterns correspond to distinct parasite migration events across the life cycle. To interrogate the role of chemosensation in the migration of larval worms, arthropod and mammalian infectious stage Brugia parasites were incubated in nicotinamide, an agonist of the nematode transient receptor potential (TRP) channel OSM-9. Exposure of microfilariae to nicotinamide alters intramosquito migration, and exposure of L3s reduces chemotaxis toward host-associated cues in vitro. Nicotinamide also potently modulates thermosensory responses in L3s, suggesting a polymodal sensory role for Brugia osm-9. Reverse genetic studies implicate both Brugia osm-9 and the cyclic nucleotide–gated (CNG) channel subunit tax-4 in larval chemotaxis toward host serum, and these ion channel subunits partially rescue sensory defects in Caenorhabditis elegans osm-9 and tax-4 knock-out strains. Together, these data reveal genetic and functional diversification of chemosensory signaling proteins in filarial worms and encourage a more thorough investigation of clade- and parasite-specific facets of nematode sensory receptor biology.

          Abstract

          Nematode parasites are a major cause of global human and animal morbidity, but the role of sensory behaviors in the complex life cycles of parasitic nematodes is not well understood. This study uncovers molecular determinants and pathways that control migratory behaviors in mosquito-transmitted filarial nematodes that cause lymphatic filariasis, a neglected tropical disease.

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          WormBase ParaSite − a comprehensive resource for helminth genomics

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            Comparative genomics of the major parasitic worms

            Parasitic nematodes (roundworms) and platyhelminths (flatworms) cause debilitating chronic infections of humans and animals, decimate crop production and are a major impediment to socioeconomic development. Here we report a broad comparative study of 81 genomes of parasitic and non-parasitic worms. We have identified gene family births and hundreds of expanded gene families at key nodes in the phylogeny that are relevant to parasitism. Examples include gene families that modulate host immune responses, enable parasite migration though host tissues or allow the parasite to feed. We reveal extensive lineage-specific differences in core metabolism and protein families historically targeted for drug development. From an in silico screen, we have identified and prioritized new potential drug targets and compounds for testing. This comparative genomics resource provides a much-needed boost for the research community to understand and combat parasitic worms.
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              A zonal organization of odorant receptor gene expression in the olfactory epithelium.

              The mechanisms by which mammals discriminate a vast array of diverse odors are poorly understood. To gain insight into the organizational strategies underlying this discriminatory capacity, we have examined the spatial distribution of odorant receptor RNAs in the mouse olfactory epithelium. We have observed topographically distinct patterns of receptor RNAs suggesting that the nasal cavity is divided into a series of expression zones. The zones exhibit bilateral symmetry in the two nasal cavities and are organized along the dorsal-ventral and medial-lateral axes. Within each zone, a neuron may select a gene for expression from a zonal gene set via a stochastic mechanism. The observed zonal patterning may serve as an initial organizing step in olfactory sensory information coding.
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                Author and article information

                Contributors
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole: MethodologyRole: SoftwareRole: SupervisionRole: ValidationRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: InvestigationRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: InvestigationRole: VisualizationRole: Writing – review & editing
                Role: Formal analysisRole: InvestigationRole: Writing – review & editing
                Role: Funding acquisitionRole: Project administrationRole: ResourcesRole: SupervisionRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole: MethodologyRole: Project administrationRole: ResourcesRole: SoftwareRole: SupervisionRole: ValidationRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: Academic Editor
                Journal
                PLoS Biol
                PLoS Biol
                plos
                plosbiol
                PLoS Biology
                Public Library of Science (San Francisco, CA USA )
                1544-9173
                1545-7885
                8 June 2020
                June 2020
                8 June 2020
                : 18
                : 6
                : e3000723
                Affiliations
                [001]Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin, United States of America
                Brandeis University, UNITED STATES
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                http://orcid.org/0000-0002-5909-4190
                http://orcid.org/0000-0002-3455-383X
                http://orcid.org/0000-0003-0582-006X
                http://orcid.org/0000-0002-6502-3284
                http://orcid.org/0000-0001-5149-9452
                http://orcid.org/0000-0001-9233-1760
                Article
                PBIOLOGY-D-19-02073
                10.1371/journal.pbio.3000723
                7302863
                32511224
                4c07dba3-74e7-4e3c-a923-b9973b792899
                © 2020 Wheeler et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 17 July 2019
                : 20 May 2020
                Page count
                Figures: 9, Tables: 0, Pages: 32
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
                Award ID: K22AI125473
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
                Award ID: R01AI151171
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100001395, Wisconsin Alumni Research Foundation;
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100013432, National Center for Veterinary Parasitology;
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
                Award ID: R21AI117204
                Award Recipient :
                Funding for MZ is provided by NIH NIAID K22 (K22AI125473, NIH.gov) and R01 (R01AI151171,NIH.gov) grants, the Wisconsin Alumni Research Foundation (WARF, warf.org), and the National Center for Veterinary Parasitology (NCVP, ncvetp.org). Funding for LCB is provided by an NIH NIAID grant (R21AI117204). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
                Model Organisms
                Caenorhabditis Elegans
                Research and Analysis Methods
                Model Organisms
                Caenorhabditis Elegans
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
                Animal Models
                Caenorhabditis Elegans
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Nematoda
                Caenorhabditis
                Caenorhabditis Elegans
                Medicine and Health Sciences
                Parasitic Diseases
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Nematoda
                Filarial Worms
                Biology and Life Sciences
                Cell Biology
                Cell Motility
                Chemotaxis
                Biology and Life Sciences
                Developmental Biology
                Life Cycles
                Larvae
                Medicine and Health Sciences
                Infectious Diseases
                Disease Vectors
                Insect Vectors
                Mosquitoes
                Biology and Life Sciences
                Species Interactions
                Disease Vectors
                Insect Vectors
                Mosquitoes
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Arthropoda
                Insects
                Mosquitoes
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Nematoda
                Brugia
                Brugia Malayi
                Biology and Life Sciences
                Developmental Biology
                Life Cycles
                Parasitic Life Cycles
                Biology and Life Sciences
                Parasitology
                Parasitic Life Cycles
                Custom metadata
                vor-update-to-uncorrected-proof
                2020-06-18
                All raw data and scripts used for comparative genomics, phylogenetics, data analysis, and data visualization are publicly available at https://github.com/zamanianlab/BrugiaChemo-ms. The optical flow algorithm for motility analysis is available at https://github.com/zamanianlab/BrugiaMotilityAnalysis. Short-read and long-read sequencing data has been deposited into NIH BioProjects PRJNA548881 and PRJNA548902, respectively. An interactive version of Fig 1 and S2 Fig is available at https://zamanianlab.shinyapps.io/ChemoR/, where chemoreceptor annotation and amino acid sequence data is available for download.

                Life sciences
                Life sciences

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