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      Chytrid fungi distribution and co-occurrence with diatoms correlate with sea ice melt in the Arctic Ocean

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          Abstract

          Global warming is rapidly altering physicochemical attributes of Arctic waters. These changes are predicted to alter microbial networks, potentially perturbing wider community functions including parasite infections and saprotrophic recycling of biogeochemical compounds. Specifically, the interaction between autotrophic phytoplankton and heterotrophic fungi e.g. chytrids (fungi with swimming tails) requires further analysis. Here, we investigate the diversity and distribution patterns of fungi in relation to abiotic variables during one record sea ice minimum in 2012 and explore co-occurrence of chytrids with diatoms, key primary producers in these changing environments. We show that chytrid fungi are primarily encountered at sites influenced by sea ice melt. Furthermore, chytrid representation positively correlates with sea ice-associated diatoms such as Fragilariopsis or Nitzschia. Our findings identify a potential future scenario where chytrid representation within these communities increases as a consequence of ice retreat, further altering community structure through perturbation of parasitic or saprotrophic interaction networks.

          Abstract

          Estelle. S. Kilias et al. show that chytrid fungi exhibiting swimming tales are primarily encountered at sites influenced by sea ice melt and that its representation positively correlates with sea ice-associated diatoms. This study predicts that chytrid representation within its Arctic communities may increase as ice retreats further.

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          Environmental science. Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes.

          The profound influence of marine plankton on the global carbon cycle has been recognized for decades, particularly for photosynthetic microbes that form the base of ocean food chains. However, a comprehensive model of the carbon cycle is challenged by unicellular eukaryotes (protists) having evolved complex behavioral strategies and organismal interactions that extend far beyond photosynthetic lifestyles. As is also true for multicellular eukaryotes, these strategies and their associated physiological changes are difficult to deduce from genome sequences or gene repertoires—a problem compounded by numerous unknown function proteins. Here, we explore protistan trophic modes in marine food webs and broader biogeochemical influences. We also evaluate approaches that could resolve their activities, link them to biotic and abiotic factors, and integrate them into an ecosystems biology framework.
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            Impact of a shrinking Arctic ice cover on marine primary production

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              Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton.

              Phylogenetic information from ribosomal RNA genes directly amplified from the environment changed our view of the biosphere, revealing an extraordinary diversity of previously undetected prokaryotic lineages. Using ribosomal RNA genes from marine picoplankton, several new groups of bacteria and archaea have been identified, some of which are abundant. Little is known, however, about the diversity of the smallest planktonic eukaryotes, and available information in general concerns the phytoplankton of the euphotic region. Here we recover eukaryotes in the size fraction 0.2-5 microm from the aphotic zone (250-3,000 m deep) in the Antarctic polar front. The most diverse and relatively abundant were two new groups of alveolate sequences, related to dinoflagellates that are found at all studied depths. These may be important components of the microbial community in the deep ocean. Their phylogenetic position suggests a radiation early in the evolution of alveolates.
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                Author and article information

                Contributors
                E.kilias@exeter.ac.uk
                Journal
                Commun Biol
                Commun Biol
                Communications Biology
                Nature Publishing Group UK (London )
                2399-3642
                21 April 2020
                21 April 2020
                2020
                : 3
                : 183
                Affiliations
                [1 ]ISNI 0000 0004 1936 8024, GRID grid.8391.3, University of Exeter, Bioscience, Living System Institute, ; Exeter, UK
                [2 ]ISNI 0000 0004 1936 8948, GRID grid.4991.5, University of Oxford, Department of Zoology, ; Oxford, UK
                [3 ]ISNI 0000 0004 1936 7486, GRID grid.6572.6, Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, ; Birmingham, UK
                [4 ]ISNI 0000 0004 1936 7486, GRID grid.6572.6, Institute of Metabolism and Systems Research, University of Birmingham, ; Birmingham, UK
                [5 ]University of Oslo, Department of Biosciences, Oslo, Norway
                [6 ]ISNI 0000 0001 1033 7684, GRID grid.10894.34, Alfred Wegener Institute for Polar and Marine Research, ; Bremerhaven, Germany
                [7 ]Helmholtz Institute for Functional Marine Biodiversity, Oldenburg, Germany
                Author information
                http://orcid.org/0000-0002-6081-3316
                http://orcid.org/0000-0003-2613-945X
                Article
                891
                10.1038/s42003-020-0891-7
                7174370
                32317738
                4db32c6c-9e58-409c-9163-5cf75de2980d
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 13 August 2019
                : 9 March 2020
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100006041, Innovate UK;
                Award ID: TS/R00546x/1
                Award Recipient :
                Categories
                Article
                Custom metadata
                © The Author(s) 2020

                ecology,biodiversity,biogeography,climate-change ecology,molecular ecology

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