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      Bacterial exopolysaccharides: biosynthesis pathways and engineering strategies

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          Abstract

          Bacteria produce a wide range of exopolysaccharides which are synthesized via different biosynthesis pathways. The genes responsible for synthesis are often clustered within the genome of the respective production organism. A better understanding of the fundamental processes involved in exopolysaccharide biosynthesis and the regulation of these processes is critical toward genetic, metabolic and protein-engineering approaches to produce tailor-made polymers. These designer polymers will exhibit superior material properties targeting medical and industrial applications. Exploiting the natural design space for production of a variety of biopolymer will open up a range of new applications. Here, we summarize the key aspects of microbial exopolysaccharide biosynthesis and highlight the latest engineering approaches toward the production of tailor-made variants with the potential to be used as valuable renewable and high-performance products for medical and industrial applications.

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          An evolving hierarchical family classification for glycosyltransferases.

          Glycosyltransferases are a ubiquitous group of enzymes that catalyse the transfer of a sugar moiety from an activated sugar donor onto saccharide or non-saccharide acceptors. Although many glycosyltransferases catalyse chemically similar reactions, presumably through transition states with substantial oxocarbenium ion character, they display remarkable diversity in their donor, acceptor and product specificity and thereby generate a potentially infinite number of glycoconjugates, oligo- and polysaccharides. We have performed a comprehensive survey of glycosyltransferase-related sequences (over 7200 to date) and present here a classification of these enzymes akin to that proposed previously for glycoside hydrolases, into a hierarchical system of families, clans, and folds. This evolving classification rationalises structural and mechanistic investigation, harnesses information from a wide variety of related enzymes to inform cell biology and overcomes recurrent problems in the functional prediction of glycosyltransferase-related open-reading frames. Copyright 2003 Elsevier Science Ltd.
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            How rhizobial symbionts invade plants: the Sinorhizobium-Medicago model.

            Nitrogen-fixing rhizobial bacteria and leguminous plants have evolved complex signal exchange mechanisms that allow a specific bacterial species to induce its host plant to form invasion structures through which the bacteria can enter the plant root. Once the bacteria have been endocytosed within a host-membrane-bound compartment by root cells, the bacteria differentiate into a new form that can convert atmospheric nitrogen into ammonia. Bacterial differentiation and nitrogen fixation are dependent on the microaerobic environment and other support factors provided by the plant. In return, the plant receives nitrogen from the bacteria, which allows it to grow in the absence of an external nitrogen source. Here, we review recent discoveries about the mutual recognition process that allows the model rhizobial symbiont Sinorhizobium meliloti to invade and differentiate inside its host plant alfalfa (Medicago sativa) and the model host plant barrel medic (Medicago truncatula).
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              Bacterial polymers: biosynthesis, modifications and applications.

              Bernd Rehm (2010)
              Bacteria can synthesize a wide range of biopolymers that serve diverse biological functions and have material properties suitable for numerous industrial and medical applications. A better understanding of the fundamental processes involved in polymer biosynthesis and the regulation of these processes has created the foundation for metabolic- and protein-engineering approaches to improve economic-production efficiency and to produce tailor-made polymers with highly applicable material properties. Here, I summarize the key aspects of bacterial biopolymer production and highlight how a better understanding of polymer biosynthesis and material properties can lead to increased use of bacterial biopolymers as valuable renewable products.
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                26 May 2015
                2015
                : 6
                : 496
                Affiliations
                [1] 1Chair of Chemistry of Biogenic Resources, Technische Universität München Straubing, Germany
                [2] 2Institute of Fundamental Sciences, Massey University Palmerston North, New Zealand
                [3] 3The MacDiarmid Institute for Advanced Materials and Nanotechnology Palmerston North, New Zealand
                Author notes

                Edited by: Weiwen Zhang, Tianjin University, China

                Reviewed by: Jun-Jie Zhang, Wuhan Institute of Virology, Chinese Academy of Sciences, China; Alan W. Decho, University of South Carolina, USA

                *Correspondence: Jochen Schmid, Chair of Chemistry of Biogenic Resources, Technische Universität München, Schulgasse 16, 94315 Straubing, Germany j.schmid@ 123456tum.de

                This article was submitted to Microbiotechnology, Ecotoxicology and Bioremediation, a section of the journal Frontiers in Microbiology

                Article
                10.3389/fmicb.2015.00496
                4443731
                26074894
                4ef2ff20-7a8e-4e4c-995e-2d7c9a4b231f
                Copyright © 2015 Schmid, Sieber and Rehm.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 13 April 2015
                : 06 May 2015
                Page count
                Figures: 5, Tables: 2, Equations: 0, References: 269, Pages: 24, Words: 0
                Categories
                Microbiology
                Review

                Microbiology & Virology
                bacterial exopolysaccharides,tailor-made exopolysaccharides,polysaccharide engineering,biosynthesis,gene clusters

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