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      Matching Dietary Amino Acid Balance to the In Silico-Translated Exome Optimizes Growth and Reproduction without Cost to Lifespan

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          Summary

          Balancing the quantity and quality of dietary protein relative to other nutrients is a key determinant of evolutionary fitness. A theoretical framework for defining a balanced diet would both reduce the enormous workload to optimize diets empirically and represent a breakthrough toward tailoring diets to the needs of consumers. Here, we report a simple and powerful in silico technique that uses the genome information of an organism to define its dietary amino acid requirements. We show for the fruit fly  Drosophila melanogaster that such “exome-matched” diets are more satiating, enhance growth, and increase reproduction relative to non-matched diets. Thus, early life fitness traits can be enhanced at low levels of dietary amino acids that do not impose a cost to lifespan. Exome matching also enhanced mouse growth, indicating that it can be applied to other organisms whose genome sequence is known.

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          Highlights

          • In silico genome translation defines amino acid ratios for exome-matched diets

          • Exome-matched diets reduce ad libitum food intake in flies and mice

          • Exome-matched diets enhance early life fitness in flies without lifespan cost

          • Improved mouse growth on an exome-matched diet demonstrates its utility for mammals

          Abstract

          Dietary protein is a critical determinant of health, but the empirical determination of optimal amino acid ratios is challenging. Piper et al. show that a consumer’s genome provides a template for optimal dietary amino acid proportions. Low amounts of optimized protein are simultaneously beneficial for appetite, growth, reproduction, and lifespan.

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          Using FlyAtlas to identify better Drosophila melanogaster models of human disease.

          FlyAtlas, a new online resource, provides the most comprehensive view yet of expression in multiple tissues of Drosophila melanogaster. Meta-analysis of the data shows that a significant fraction of the genome is expressed with great tissue specificity in the adult, demonstrating the need for the functional genomic community to embrace a wide range of functional phenotypes. Well-known developmental genes are often reused in surprising tissues in the adult, suggesting new functions. The homologs of many human genetic disease loci show selective expression in the Drosophila tissues analogous to the affected human tissues, providing a useful filter for potential candidate genes. Additionally, the contributions of each tissue to the whole-fly array signal can be calculated, demonstrating the limitations of whole-organism approaches to functional genomics and allowing modeling of a simple tissue fractionation procedure that should improve detection of weak or tissue-specific signals.
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            Evolution of ageing.

            T Kirkwood (1977)
            An evolutionary view of ageing suggests that mortality may be due to an energy-saving strategy of reduced error regulation in somatic cells. This supports Orgel's 'error catastrophe' hypothesis and offers a new basis for the study of normal and abnormal ageing syndromes and of apparently immortal transformed cell lines.
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              • Record: found
              • Abstract: found
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              Gut microbiota dictates the metabolic response of Drosophila to diet.

              Animal nutrition is profoundly influenced by the gut microbiota, but knowledge of the scope and core mechanisms of the underlying animal-microbiota interactions is fragmentary. To investigate the nutritional traits shaped by the gut microbiota of Drosophila, we determined the microbiota-dependent response of multiple metabolic and performance indices to systematically varied diet composition. Diet-dependent differences between Drosophila bearing its unmanipulated microbiota (conventional flies) and experimentally deprived of its microbiota (axenic flies) revealed evidence for: microbial sparing of dietary B vitamins, especially riboflavin, on low-yeast diets; microbial promotion of protein nutrition, particularly in females; and microbiota-mediated suppression of lipid/carbohydrate storage, especially on high sugar diets. The microbiota also sets the relationship between energy storage and body mass, indicative of microbial modulation of the host signaling networks that coordinate metabolism with body size. This analysis identifies the multiple impacts of the microbiota on the metabolism of Drosophila, and demonstrates that the significance of these different interactions varies with diet composition and host sex. © 2014. Published by The Company of Biologists Ltd.
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                Author and article information

                Contributors
                Journal
                Cell Metab
                Cell Metab
                Cell Metabolism
                Cell Press
                1550-4131
                1932-7420
                07 March 2017
                07 March 2017
                : 25
                : 3
                : 610-621
                Affiliations
                [1 ]Institute of Healthy Ageing and Department of Genetics, Evolution, and Environment, University College London, London WC1E 6BT, UK
                [2 ]Max Planck Institute for Biology of Ageing, Köln 50931, Germany
                [3 ]Berlin Institute of Health, Berlin 10117, Germany
                [4 ]Behavior and Metabolism Laboratory, Champalimaud Centre for the Unknown, Lisbon 1400-038, Portugal
                [5 ]UCL Ear Institute, University College London, London WC1X 8EE, UK
                [6 ]Institute of Animal Genetics and Breeding, Sichuan Agricultural University, Chengdu 611130, China
                [7 ]Charles Perkins Centre, School of Life and Environmental Sciences, University of Sydney, Sydney 2050, Australia
                Author notes
                []Corresponding author matthew.piper@ 123456monash.edu
                [∗∗ ]Corresponding author partridge@ 123456age.mpg.de
                [8]

                Co-first author

                [9]

                Present address: School of Biological Sciences, Monash University, Clayton 3800, Australia

                [10]

                Lead Contact

                Article
                S1550-4131(17)30095-5
                10.1016/j.cmet.2017.02.005
                5355364
                28273481
                50d5733d-911f-44de-b3a0-3b56d8a4a779
                © 2017 The Author(s)

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 26 July 2016
                : 22 December 2016
                : 9 February 2017
                Categories
                Article

                Cell biology
                amino acids,diet balance,dietary restriction,fitness,trade-off,reproduction,lifespan,growth,mouse,drosophila

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