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      Clinicopathological features of Lynch syndrome pedigrees with MSH2 c.351G>A gene variant

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          Abstract

          Background

          Lynch syndrome (LS) is an autosomal‐dominant disorder that increases the risk of many cancers. To identify novel or rare pathogenic variants of MMR genes associated with LS, especially in Chinese pedigrees.

          Methods

          One four‐generation Chinese Han family from northeast China with 29 members was enrolled. Clinical diagnosis of LS was established in this family, according to Amsterdam II. The proband and some relatives of the family were subjected to immunohistochemical analysis of MMR protein, microsatellite instability (MSI) testing, whole‐exome sequencing, and Sanger sequencing.

          Results

          Nine patients with 19 primary cancers were found in this family, with a wide spectrum of synchronous and metachronous cancers, including digestive, reproductive, respiratory, urinary, and other systems. In addition, one member of this family is found to have both thyroid and lung cancers, which have been reported only once in LS patients before but have not been considered extracolonic in the LS spectrum. The immunohistochemical analysis of the mother of the proband showed loss of MSH2 and MSH6 protein, and consistently, high microsatellite instability (MSI‐H) was confirmed in LS patients. Furthermore, whole‐exome sequencing identified a nonsense variant in MSH2, MSH2:NM_000251:c.351G > A(p.W117*), in all three tested LS patients (II‐1, III‐1, and III‐4), but not in healthy relatives IV‐1 in this family. This result is further verified by Sanger sequencing.

          Conclusion

          Uncover a rare nonsense variant in MSH2 gene, which contributes to LS of this family. The clinicopathological characteristics of LS in this family include common simultaneous or heterogeneous multiple primary cancers, a broad tumor spectrum, and a younger age with the continuation of genetic algebra.

          Abstract

          Pedigree structure of the four‐generation Chinese Han family with Lynch syndrome.

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          Most cited references31

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          ClinVar: improving access to variant interpretations and supporting evidence

          Abstract ClinVar (https://www.ncbi.nlm.nih.gov/clinvar/) is a freely available, public archive of human genetic variants and interpretations of their significance to disease, maintained at the National Institutes of Health. Interpretations of the clinical significance of variants are submitted by clinical testing laboratories, research laboratories, expert panels and other groups. ClinVar aggregates data by variant-disease pairs, and by variant (or set of variants). Data aggregated by variant are accessible on the website, in an improved set of variant call format files and as a new comprehensive XML report. ClinVar recently started accepting submissions that are focused primarily on providing phenotypic information for individuals who have had genetic testing. Submissions may come from clinical providers providing their own interpretation of the variant (‘provider interpretation’) or from groups such as patient registries that primarily provide phenotypic information from patients (‘phenotyping only’). ClinVar continues to make improvements to its search and retrieval functions. Several new fields are now indexed for more precise searching, and filters allow the user to narrow down a large set of search results.
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            A National Cancer Institute Workshop on Microsatellite Instability for cancer detection and familial predisposition: development of international criteria for the determination of microsatellite instability in colorectal cancer.

            In December 1997, the National Cancer Institute sponsored "The International Workshop on Microsatellite Instability and RER Phenotypes in Cancer Detection and Familial Predisposition," to review and unify the field. The following recommendations were endorsed at the workshop. (a) The form of genomic instability associated with defective DNA mismatch repair in tumors is to be called microsatellite instability (MSI). (b) A panel of five microsatellites has been validated and is recommended as a reference panel for future research in the field. Tumors may be characterized on the basis of: high-frequency MSI (MSI-H), if two or more of the five markers show instability (i.e., have insertion/deletion mutations), and low-frequency MSI (MSI-L), if only one of the five markers shows instability. The distinction between microsatellite stable (MSS) and low frequency MSI (MSI-L) can only be accomplished if a greater number of markers is utilized. (c) A unique clinical and pathological phenotype is identified for the MSI-H tumors, which comprise approximately 15% of colorectal cancers, whereas MSI-L and MSS tumors appear to be phenotypically similar. MSI-H colorectal tumors are found predominantly in the proximal colon, have unique histopathological features, and are associated with a less aggressive clinical course than are stage-matched MSI-L or MSS tumors. Preclinical models suggest the possibility that these tumors may be resistant to the cytotoxicity induced by certain chemotherapeutic agents. The implications for MSI-L are not yet clear. (d) MSI can be measured in fresh or fixed tumor specimens equally well; microdissection of pathological specimens is recommended to enrich for neoplastic tissue; and normal tissue is required to document the presence of MSI. (e) The "Bethesda guidelines," which were developed in 1996 to assist in the selection of tumors for microsatellite analysis, are endorsed. (f) The spectrum of microsatellite alterations in noncolonic tumors was reviewed, and it was concluded that the above recommendations apply only to colorectal neoplasms. (g) A research agenda was recommended.
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              Quality and quantity control of gene expression by nonsense-mediated mRNA decay

              Nonsense-mediated mRNA decay (NMD) is one of the best characterized and most evolutionarily conserved cellular quality control mechanisms. Although NMD was first found to target one-third of mutated, disease-causing mRNAs, it is now known to also target ~10% of unmutated mammalian mRNAs to facilitate appropriate cellular responses — adaptation, differentiation or death — to environmental changes. Mutations in NMD genes in humans are associated with intellectual disability and cancer. In this Review, we discuss how NMD serves multiple purposes in human cells by degrading both mutated mRNAs to protect the integrity of the transcriptome and normal mRNAs to control the quantities of unmutated transcripts.
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                Author and article information

                Contributors
                xxli63@cmu.edu.cn
                Journal
                Mol Genet Genomic Med
                Mol Genet Genomic Med
                10.1002/(ISSN)2324-9269
                MGG3
                Molecular Genetics & Genomic Medicine
                John Wiley and Sons Inc. (Hoboken )
                2324-9269
                02 January 2025
                January 2025
                : 13
                : 1 ( doiID: 10.1002/mgg3.v13.1 )
                : e2506
                Affiliations
                [ 1 ] Department of General Surgery Yan'an people's Hospital Shaanxi China
                [ 2 ] Department of General Surgery The Fourth Affiliated Hospital, China Medical University Shenyang Liaoning China
                [ 3 ] Department of Fifth Treatment Areas of Anorectal Disease Shenyang Coloproctology Hospital Shenyang Liaoning China
                Author notes
                [*] [* ] Correspondence

                Xiaoxia Li, Department of General Surgery, The Fourth Affiliated Hospital, China Medical University, Shenyang, Liaoning Province 110032, China.

                Email: xxli63@ 123456cmu.edu.cn

                Author information
                https://orcid.org/0000-0003-3972-9715
                Article
                MGG32506 MGG3-2023-08-1223.R3
                10.1002/mgg3.2506
                11695460
                39748562
                519c4da0-c434-4c97-86e6-1b456faef583
                © 2024 The Author(s). Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 24 July 2024
                : 22 August 2023
                : 30 July 2024
                Page count
                Figures: 7, Tables: 1, Pages: 12, Words: 6100
                Funding
                Funded by: Population and Health Applied Techniques Research Fund of Shenyang Municipal Technology Project
                Award ID: 18‐014‐4‐19
                Funded by: Yan'an Science and Technology Plan Project
                Award ID: SL2019ZCSY‐102
                Funded by: basic scientific research projects of universities in Liaoning Province
                Award ID: LFWK201712
                Funded by: basic scientific research projects in Shanxi Province
                Award ID: 2020JM‐704
                Categories
                Original Article
                Original Article
                Custom metadata
                2.0
                January 2025
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.5.1 mode:remove_FC converted:03.01.2025

                chinese family,clinicopathological features,lynch syndrome, msh2 gene variant

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