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      Earth history events shaped the evolution of uneven biodiversity across tropical moist forests

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          Significance

          Tropical moist forests harbor much of the world’s biodiversity, but this diversity is not evenly distributed globally, with tropical moist forests in the Neotropics and Indomalaya generally exhibiting much greater diversity than in the Afrotropics. Here, we assess the ubiquity of this “pantropical diversity disparity” (PDD) using the present-day distributions of over 150,000 species of plants and animals, and we compare these distributions with a spatial model of diversification combined with reconstructions of plate tectonics, temperature, and aridity. Our study demonstrates that differences in paleoenvironmental dynamics between continents, including mountain building, aridification, and global temperature fluxes, can explain the PDD by shaping spatial and temporal patterns of species origination and extinction, providing a close match to observed distributions of plants and animals.

          Abstract

          Far from a uniform band, the biodiversity found across Earth’s tropical moist forests varies widely between the high diversity of the Neotropics and Indomalaya and the relatively lower diversity of the Afrotropics. Explanations for this variation across different regions, the “pantropical diversity disparity” (PDD), remain contentious, due to difficulty teasing apart the effects of contemporary climate and paleoenvironmental history. Here, we assess the ubiquity of the PDD in over 150,000 species of terrestrial plants and vertebrates and investigate the relationship between the present-day climate and patterns of species richness. We then investigate the consequences of paleoenvironmental dynamics on the emergence of biodiversity gradients using a spatially explicit model of diversification coupled with paleoenvironmental and plate tectonic reconstructions. Contemporary climate is insufficient in explaining the PDD; instead, a simple model of diversification and temperature niche evolution coupled with paleoaridity constraints is successful in reproducing the variation in species richness and phylogenetic diversity seen repeatedly among plant and animal taxa, suggesting a prevalent role of paleoenvironmental dynamics in combination with niche conservatism. The model indicates that high biodiversity in Neotropical and Indomalayan moist forests is driven by complex macroevolutionary dynamics associated with mountain uplift. In contrast, lower diversity in Afrotropical forests is associated with lower speciation rates and higher extinction rates driven by sustained aridification over the Cenozoic. Our analyses provide a mechanistic understanding of the emergence of uneven diversity in tropical moist forests across 110 Ma of Earth’s history, highlighting the importance of deep-time paleoenvironmental legacies in determining biodiversity patterns.

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          Most cited references104

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          WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

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            Terrestrial Ecoregions of the World: A New Map of Life on Earth

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              Picante: R tools for integrating phylogenies and ecology.

              Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, performs trait comparative analyses, manipulates phenotypic and phylogenetic data, and performs tests for phylogenetic signal in trait distributions, community structure and species interactions. Picante is a package for the R statistical language and environment written in R and C, released under a GPL v2 open-source license, and freely available on the web (http://picante.r-forge.r-project.org) and from CRAN (http://cran.r-project.org).
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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc Natl Acad Sci U S A
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                05 October 2021
                01 October 2021
                01 October 2021
                : 118
                : 40
                : e2026347118
                Affiliations
                [1] aLandscape Ecology, Institute of Terrestrial Ecosystems, Department of Environmental Systems Science, Eidgenössische Technische Hochschule (ETH) Zürich , 8092 Zürich, Switzerland;
                [2] bUnit of Land Change Science, Swiss Federal Research Institute for Forest, Snow and Landscape (WSL) , 8903 Birmensdorf, Switzerland;
                [3] cEvolution and Adaptation Research Group, German Centre for Integrative Biodiversity Research (iDiv) Halle–Jena–Leipzig , 04103 Leipzig, Germany;
                [4] dDepartment of Ecology and Evolutionary Biology, Yale University , New Haven, CT 06520;
                [5] eCenter for Biodiversity and Global Change, Yale University , New Haven, CT 06520
                Author notes

                Edited by Nils Chr. Stenseth, Universitetet i Oslo, Oslo, Norway, and approved August 28, 2021 (received for review December 22, 2020)

                Author contributions: O.H., A.S., and L.P. designed research; O.H., A.S., and W.J. contributed new reagents/analytic tools; O.H., A.S., and R.E.O. analyzed data; and O.H., A.S., R.E.O., W.J., and L.P. wrote the paper.

                1O.H. and A.S. contributed equally to this work.

                Author information
                http://orcid.org/0000-0002-7931-6571
                http://orcid.org/0000-0002-9973-4703
                http://orcid.org/0000-0002-2295-3510
                http://orcid.org/0000-0002-1971-7277
                Article
                202026347
                10.1073/pnas.2026347118
                8501849
                34599095
                56368688-f86f-43f5-a266-9a2244683e3d
                Copyright © 2021 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY).

                History
                : 28 August 2021
                Page count
                Pages: 000
                Funding
                Funded by: Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNF) 501100001711
                Award ID: 310030$_$188550
                Award Recipient : Alexander Skeels Award Recipient : Loic Pellisier
                Funded by: Deutsche Forschungsgemeinschaft (DFG) 501100001659
                Award ID: DFG-FZT 118
                Award ID: 202548816
                Award Recipient : Renske E Onstein
                Categories
                418
                Biological Sciences
                Evolution

                plate tectonics,paleoclimate,gen3sis,mechanistic modeling,pantropical diversity disparity

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