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      INOSA Guidelines in the era of precision medicine

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      The Indian Journal of Medical Research
      Medknow Publications & Media Pvt Ltd

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          Abstract

          Sir, Sharma and his co-authors are to be congratulated for their excellent and comprehensive suggested first edition of the INdian initiative on Obstructive Sleep Apnoea (INOSA) guidelines published in 20141. Since the guidelines are described as “evidence-based”, without denigrating the quality of their work, the purpose of the present letter is to add a few remarks on two issues briefly touched in these guidelines, which should further enhance justifications of such evidence-based guidelines. These remarks may also be of value to make the guidelines potentially “individualized”, since there is a global shift of paradigms of detection, management and treatment of medical problems of significant public health burden through initiatives such as “precision medicine”2. Since the basic premise of precision medicine is to take into account individual variability in developing strategies of prevention as well as treatment of diseases, the role of genetic predisposition is to be emphasized as a risk factor of obstructive sleep apnoea (OSA) as well as its associated syndromes (OSAS), mentioned in Table II of the guidelines paper1. Our own data3 as well as reviews and notes published on this subject4 5 suggest that candidate gene regions that are shown to be associated with OSA and/or OSAS are not of mere statistical significance detected through epidemiological case-control studies; they have their functional relevance as well. For example, associations of OSA/OSAS with polymorphisms at the peroxisome proliferator-activated receptor-γ (PPARG), and glucagon receptor genes directly explain the co-morbid relationship of OSA/OSAS with centralized obesity, since polymorphisms at these two gene regions are also associated with central adiposity. Likewise, the Leptin (LEP) gene is a critical regulator of adipose tissue mass of body weight, and it operates by inhibiting food intake and stimulating energy expenditure (both of which are involved in mechanistic pathogenesis of obesity6). Consequently, the association of LEP polymorphism with OSA/OSAS is likely to be more than of only statistical significance. The association of APOE polymorphisms with OSA/OSAS could be through the functional involvement of APOE in neurological degeneration and dyslipidaemia4. For such reasons, these genes were listed as candidate genes for OSA/OSAS4. In terms of management and treatment of OSA and its associated co-morbid conditions, identification of such genetic risk factors has at least three important implications. First, such candidate gene discoveries can help in defining phenotypes that may serve as intermediate phenotypes of OSA, which may be used as indicators of more readily treatable precursors or consequences of OSA/OSAS. In this context, it is worthwhile to note that several of the morbid conditions (listed in Table III of the guidelines paper1) as well as the ones we detected7, may be precursor intermediate phenotypes of OSA rather than being consequences of OSA. Irrespective of this, genes underlying such phenotypes would also be the foci of familial hereditary risk factors of OSA/OSAS. This would also help in more precise (and perhaps individualized) diagnosis of OSA, since the algorithm for diagnosis (depicted in Figure 2 of the guidelines paper1) can be revised by incorporating such intermediate phenotypes. Second, genes underlying correlated phenotypes also serve as therapeutic targets for management and treatment for majority of such phenotypes. In the area of cancer treatment, with the use of The Cancer Genome Atlas (TCGA) data, such efforts have been proven to be useful in identifying tissue- or mutation-specific functions of proteins that may be targeted for inhibiting development and progression of otherwise aggressive cancers8. Third, the precise sites of gene associations would allow clinical investigations with respect to ‘individual-specific’ modalities of treatment for OSA/OSAS. For example, individual genotypes at the single nucleotide polymorphism (SNP) sites rs15780, rs405509, rs769455 and rs7412 of the APOE gene, that are associated with OSA3 can be tested to examine if the suggested measures for treating OSA (see Box 5 of the guidelines paper1) work equally well for individuals who are genetically predisposed as compared to others. Similar genotype-specific efficacy studies of different types of positive airway pressure (PAP) can also be performed to examine which type of PAP-therapy works better in individuals who are genetically predisposed for OSA-risk. The second issue that may be further discussed relates to surgical treatment of OSA. We conducted a retrospective analysis of pre- and post-operative (for weight-loss) polysomnographic data from adolescents with severe obesity9. We observed a marked improvement in sleep efficiency and sleep fragmentation with surgical weight loss, which is consistent with the suggestions made in section 5 of the guidelines paper1. However, it may be emphasized that there is now emerging evidence that surgical weight loss results in improvement in quality of life6, through resolution of obesity-associated psychosocial, metabolic, and cardiovascular morbidity. Consequently, it may be suggested that correction of sleep fragmentation could be an important but as yet underappreciated factor influencing changes in other major comorbidities of obesity, including OSA/OSAS. In summation, Sharma et al 1 provided a basis of INOSA guidelines that may be further substantiated to attempt diagnosis, management and treatment of OSA and its associated medical adversities, in which evidence-based individualized characteristics of patients may be incorporated for reducing the public health burden of this sleep disorder.

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          Most cited references8

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          MTBP is overexpressed in triple-negative breast cancer and contributes to its growth and survival.

          Triple-negative breast cancer (TNBC) is a clinically aggressive subtype of breast cancer commonly resistant to therapeutics that have been successful in increasing survival in patients with estrogen receptor-positive (ER(+)) and HER2(+) breast cancer. As such, identifying factors that contribute to poor patient outcomes and mediate the growth and survival of TNBC cells remain important areas of investigation. MTBP (MDM2-binding protein), a gene linked to cellular proliferation and a transcriptional target of the MYC oncogene, is overexpressed in human malignancies, yet its contribution to cancer remains unresolved. Evaluation of mRNA expression and copy number variation data from The Cancer Genome Atlas (TCGA) revealed that MTBP is commonly overexpressed in breast cancer and 19% show amplification of MTBP. Increased transcript or gene amplification of MTBP significantly correlated with reduced breast cancer patient survival. Further analysis revealed that while MTBP mRNA is overexpressed in both ER(+) and HER2(+) breast cancers, its expression is highest in TNBC. MTBP mRNA and protein levels were also significantly elevated in a panel of human TNBC cell lines. Knockdown of MTBP in TNBC cells induced apoptosis and significantly reduced TNBC cell growth and soft agar colony formation, which was rescued by expression of shRNA-resistant Mtbp. Notably, inducible knockdown of MTBP expression significantly impaired TNBC tumor growth, in vivo, including in established tumors. Thus, these data emphasize that MTBP is important for the growth and survival of TNBC and warrants further investigation as a potential novel therapeutic target.
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            Association of ApoE genetic variants with obstructive sleep apnea in children.

            Although several studies have reported an association between obstructive sleep apnea (OSA) and the chromosomal region containing the Apolipoprotein E (ApoE) gene, findings about the exact location in the ApoE gene have been inconsistent. The objective of our study was thus to determine the allele, genotype, and haplotype frequencies at several single nucleotide polymorphisms (SNPs) in the region of ApoE and test their association with OSA status in children. Caucasian children, ranging in age from 2 to 21 years, with polysomnographic evidence of OSA (>1 obstructive apnea or obstructive hypopnea episodes per hour of sleep) were recruited in the case group. Our race- and gender-matched control group was recruited from a population-based cohort of children enrolled in the Princeton School District Study. Comparison of allele and genotype frequencies between cases (n=92) and controls (n=92) revealed significant differences for SNPs rs405509 and rs7412. Multivariate logistic regression analysis with age and body mass index (BMI) as covariates revealed a significant association between OSA status and SNPs rs157580, rs405509, rs769455 and rs7412. The sliding window haplotype trend regression test revealed that SNP rs405509 was included in all haplotypes that are significantly associated with OSA status. We conclude that polymorphisms involving more than one locus in the ApoE gene and its regulatory region are associated with OSA in children. Further studies replicating these findings in different populations are needed as are studies involving fine mapping of this region.
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              Effect of surgical weight loss on sleep architecture in adolescents with severe obesity.

              Sleep duration and sleep fragmentation have been proposed to play a role in the development and progression of obesity-associated morbidity. Weight loss results in resolution of obesity-associated morbidity. Our aim was to determine the effect of weight loss on sleep architecture in adolescents with severe obesity. Retrospective analysis of polysomnograhic data from all adolescents who underwent overnight sleep study before and after weight loss surgery was performed. Polysomnographic variables of sleep architecture after weight loss were compared to baseline by paired Student's t test (normally distributed data) or Wilcoxon test (variables not meeting normality criteria). The mean (+/-SEM) age of 19 subjects meeting inclusion criteria was 16.5 +/- 0.35 years, mean body mass index was 60.3 +/- 2.11 kg/m2, and 66% were female. Obstructive sleep apnea was present in 14 subjects (74%). The average interval between the baseline and repeat polysomnograms was 0.91 +/- 0.16 years, and average weight loss was 66.4 +/- 8.8 kg. Surgical weight loss resulted in increased sleep efficiency (80.2% vs 73.1%, p = 0.01), reduced time in stage 1 sleep (3.0% vs 6.0%, p = 0.02), and reduced arousal index (7.6 +/- 0.6/h vs 11.3 +/- 1.2, p = 0.01). Our data demonstrate a marked improvement in sleep efficiency and sleep fragmentation with surgical weight loss. Given the emerging evidence that surgical weight loss results in resolution of obesity-associated psychosocial, metabolic, and cardiovascular morbidity, these results suggest that correction of sleep fragmentation could be an important but as yet underappreciated factor influencing changes in these other major comorbidities of obesity.
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                Author and article information

                Journal
                Indian J Med Res
                Indian J. Med. Res
                IJMR
                The Indian Journal of Medical Research
                Medknow Publications & Media Pvt Ltd (India )
                0971-5916
                0975-9174
                August 2015
                : 142
                : 2
                : 225-226
                Affiliations
                [1]Department of Molecular and Medical Genetics, Center for Computational Genomics, Institute of Applied Genetics, University of North Texas Health Science Center 3500 Camp Bowie Blvd, Rom CBH-249 Fort Worth, Texas 76109, USA ranajit.chakraborty@ 123456unthsc.edu
                Article
                IJMR-142-225
                10.4103/0971-5916.164264
                4613446
                26354222
                5638b5a3-b852-45cb-b312-129a375062ef
                Copyright: © Indian Journal of Medical Research

                This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as the author is credited and the new creations are licensed under the identical terms

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