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      Cavity Lasing of Thioflavin T in the Condensed Phase for Discrimination between Surface Interaction and β-Sheet Groove Binding in Alzheimer-Linked Peptides

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      The Journal of Physical Chemistry Letters
      American Chemical Society

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          Abstract

          This study investigates the lasing effects in a Fabry–Perot cavity to discern the binding interactions of thioflavin T (ThT) with various peptides associated with Alzheimer’s disease, including Aβ(1–42), KLVFFA, and diphenylalanine (FF) in the condensed phase. Utilizing kinetic lasing measurements, the research explores ThT emission enhancements due to specific groove binding in β-sheet structures and highlights additional contributions from weak surface interactions and solvent–solute interactions. Lasing spectroscopy reveals a lack of transition of the FF system from its native state to an amyloid-like structure, challenging traditional ThT assay interpretations. These findings show the potential of lasing spectroscopy in elucidating the molecular basis of amyloid fibril formation and the development of diagnostic tools for amyloidogenic diseases.

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          Most cited references26

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          Population estimate of people with clinical Alzheimer's disease and mild cognitive impairment in the United States (2020–2060)

          The estimate of people with clinical Alzheimer's disease (AD) and mild cognitive impairment provides an understanding of the disease burden.
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            A possible role for pi-stacking in the self-assembly of amyloid fibrils.

            Ehud Gazit (2002)
            Amyloid fibril formation is assumed to be the molecular basis for a variety of diseases of unrelated origin. Despite its fundamental clinical importance, the mechanism of amyloid formation is not fully understood. When we analyzed a variety of short functional fragments from unrelated amyloid-forming proteins, a remarkable occurrence of aromatic residues was observed. The finding of aromatic residues in diverse fragments raises the possibility that pi-pi interactions may play a significant role in the molecular recognition and self-assembly processes that lead to amyloid formation. This is in line with the well-known central role of pi-stacking interactions in self-assembly processes in the fields of chemistry and biochemistry. We speculate that the stacking interactions may provide energetic contribution as well as order and directionality in the self-assembly of amyloid structures. Experimental data regarding amyloid formation and inhibition by short peptide analogs also support our hypothesis. The pi-stacking hypothesis suggests a new approach to understanding the self-assembly mechanism that governs amyloid formation and indicates possible ways to control this process.
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              Synaptic degeneration in Alzheimer disease

              Alzheimer disease (AD) is characterized by progressive cognitive decline in older individuals accompanied by the presence of two pathological protein aggregates - amyloid-β and phosphorylated tau - in the brain. The disease results in brain atrophy caused by neuronal loss and synapse degeneration. Synaptic loss strongly correlates with cognitive decline in both humans and animal models of AD. Indeed, evidence suggests that soluble forms of amyloid-β and tau can cause synaptotoxicity and spread through neural circuits. These pathological changes are accompanied by an altered phenotype in the glial cells of the brain - one hypothesis is that glia excessively ingest synapses and modulate the trans-synaptic spread of pathology. To date, effective therapies for the treatment or prevention of AD are lacking, but understanding how synaptic degeneration occurs will be essential for the development of new interventions. Here, we highlight the mechanisms through which synapses degenerate in the AD brain, and discuss key questions that still need to be answered. We also cover the ways in which our understanding of the mechanisms of synaptic degeneration is leading to new therapeutic approaches for AD.
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                Author and article information

                Journal
                J Phys Chem Lett
                J Phys Chem Lett
                jz
                jpclcd
                The Journal of Physical Chemistry Letters
                American Chemical Society
                1948-7185
                12 September 2024
                19 September 2024
                : 15
                : 37
                : 9543-9547
                Affiliations
                []Institute of Experimental Physics, Faculty of Physics, University of Warsaw , Pasteura 5, 02-093 Warsaw, Poland
                []Center of Cellular Immunotherapies, Warsaw University of Life Sciences , 02-786 Warsaw, Poland
                Author notes
                Author information
                https://orcid.org/0000-0002-1460-8477
                Article
                10.1021/acs.jpclett.4c01709
                11417991
                39265045
                5664d2ed-05b7-4f8c-b776-fb2d30300ba3
                © 2024 The Author. Published by American Chemical Society

                Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained ( https://creativecommons.org/licenses/by/4.0/).

                History
                : 08 June 2024
                : 12 August 2024
                : 22 August 2024
                Funding
                Funded by: Narodowe Centrum Nauki, doi 10.13039/501100004281;
                Award ID: 2021/43/D/ST4/01741
                Categories
                Letter
                Custom metadata
                jz4c01709
                jz4c01709

                Physical chemistry
                Physical chemistry

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