Ca 2+ flux into mitochondria is an important regulator of cytoplasmic Ca 2+ signals, energy production and cell death pathways. Ca 2+ uptake can occur through the recently discovered mitochondrial uniporter channel (MCU) but whether the MCU is involved in shaping Ca 2+ signals and downstream responses to physiological levels of receptor stimulation is unknown. Here, we show that modest stimulation of leukotriene receptors with the pro-inflammatory signal LTC 4 evokes a series of cytoplasmic Ca 2+ oscillations that are rapidly and faithfully propagated into mitochondrial matrix. Knockdown of MCU or mitochondrial depolarisation, to reduce the driving force for Ca 2+ entry into the matrix, prevents the mitochondrial Ca 2+ rise and accelerates run down of the oscillations. The loss of cytoplasmic Ca 2+ oscillations appeared to be a consequence of enhanced Ca 2+-dependent inactivation of InsP 3 receptors, which arose from the loss of mitochondrial Ca 2+ buffering. Ca 2+ dependent gene expression in response to leukotriene receptor activation was suppressed following knockdown of the MCU. In addition to buffering Ca 2+ release, mitochondria also sequestrated Ca 2+ entry through store-operated Ca 2+ channels and this too was prevented following loss of MCU. MCU is therefore an important regulator of physiological pulses of cytoplasmic Ca 2+.