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      NMR Structure of the Myristylated Feline Immunodeficiency Virus Matrix Protein

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          Abstract

          Membrane targeting by the Gag proteins of the human immunodeficiency viruses (HIV types-1 and -2) is mediated by Gag’s N-terminally myristylated matrix (MA) domain and is dependent on cellular phosphatidylinositol-4,5-bisphosphate [PI(4,5)P 2]. To determine if other lentiviruses employ a similar membrane targeting mechanism, we initiated studies of the feline immunodeficiency virus (FIV), a widespread feline pathogen with potential utility for development of human therapeutics. Bacterial co-translational myristylation was facilitated by mutation of two amino acids near the amino-terminus of the protein (Q5A/G6S; myrMA Q5A/G6S). These substitutions did not affect virus assembly or release from transfected cells. NMR studies revealed that the myristyl group is buried within a hydrophobic pocket in a manner that is structurally similar to that observed for the myristylated HIV-1 protein. Comparisons with a recent crystal structure of the unmyristylated FIV protein [myr(-)MA] indicate that only small changes in helix orientation are required to accommodate the sequestered myr group. Depletion of PI(4,5)P 2 from the plasma membrane of FIV-infected CRFK cells inhibited production of FIV particles, indicating that, like HIV, FIV hijacks the PI(4,5)P 2 cellular signaling system to direct intracellular Gag trafficking during virus assembly.

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          Most cited references60

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          Automated NMR structure calculation with CYANA.

          This chapter gives an introduction to automated nuclear magnetic resonance (NMR) structure calculation with the program CYANA. Given a sufficiently complete list of assigned chemical shifts and one or several lists of cross-peak positions and columns from two-, three-, or four-dimensional nuclear Overhauser effect spectroscopy (NOESY) spectra, the assignment of the NOESY cross-peaks and the three-dimensional structure of the protein in solution can be calculated automatically with CYANA.
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            The HIV lipidome: a raft with an unusual composition.

            The lipids of enveloped viruses play critical roles in viral morphogenesis and infectivity. They are derived from the host membranes from which virus budding occurs, but the precise lipid composition has not been determined for any virus. Employing mass spectrometry, this study provides a quantitative analysis of the lipid constituents of HIV and a comprehensive comparison with its host membranes. Both a substantial enrichment of the unusual sphingolipid dihydrosphingomyelin and a loss of viral infectivity upon inhibition of sphingolipid biosynthesis in host cells are reported, establishing a critical role for this lipid class in the HIV replication cycle. Intriguingly, the overall lipid composition of native HIV membranes resembles detergent-resistant membrane microdomains and is strikingly different from that of host cell membranes. With this composition, the HIV lipidome provides strong evidence for the existence of lipid rafts in living cells.
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              Fatty acylation of proteins: new insights into membrane targeting of myristoylated and palmitoylated proteins.

              M Resh (1999)
              Covalent attachment of myristate and/or palmitate occurs on a wide variety of viral and cellular proteins. This review will highlight the latest advances in our understanding of the enzymology of N-myristoylation and palmitoylation as well as the functional consequences of fatty acylation of key signaling proteins. The role of myristate and palmitate in promoting membrane binding as well as specific membrane targeting will be reviewed, with emphasis on the Src family of tyrosine protein kinases and alpha subunits of heterotrimeric G proteins. The use of myristoyl switches and regulated depalmitoylation as mechanisms for achieving reversible membrane binding and regulated signaling will also be explored.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                Viruses
                Viruses
                viruses
                Viruses
                MDPI
                1999-4915
                30 April 2015
                May 2015
                : 7
                : 5
                : 2210-2229
                Affiliations
                [1 ]Howard Hughes Medical Institute, University of Maryland Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250, USA; E-Mails: lola.brown@ 123456yale.edu (L.A.B.); cassiah.cox@ 123456nih.gov (C.C.); janaeb@ 123456umbc.edu (J.B.); hsummers@ 123456umbc.edu (H.S.); ryan.button@ 123456umaryland.edu (R.B.); kennedy.bahlow@ 123456temple.edu (K.B.); vspurrier@ 123456uchicago.edu (V.S.); jmk216@ 123456lehigh.edu (J.K.)
                [2 ]Virus-Cell Interaction Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, MD 21702-1201, USA; E-Mails: bxl244@ 123456case.edu (B.G.L.); kuols@ 123456mail.nih.gov (L.K.)
                Author notes
                [* ]Authors to whom correspondence should be addressed; E-Mails: efreed@ 123456mail.nih.gov (E.O.F.); summers@ 123456hhmi.umbc.edu (M.F.S.); Tel.: +1-301-846-6223 (E.O.F.); +1-410-455-2527 (M.F.S).
                Article
                viruses-07-02210
                10.3390/v7052210
                4452903
                25941825
                587a2682-6bb7-4875-a590-fafc62d7587b
                © 2015 by the authors; licensee MDPI, Basel, Switzerland.

                This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 05 March 2015
                : 21 April 2015
                Categories
                Article

                Microbiology & Virology
                feline immunodeficiency virus (fiv),nuclear magnetic resonance (nmr),protein structure,retrovirus assembly,membrane targeting,phosphatidylinositol-4,5-bisphosphate [pi(4,5)-p2,pip2]

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