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      Optimal Bayesian design for model discrimination via classification

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          Abstract

          Performing optimal Bayesian design for discriminating between competing models is computationally intensive as it involves estimating posterior model probabilities for thousands of simulated data sets. This issue is compounded further when the likelihood functions for the rival models are computationally expensive. A new approach using supervised classification methods is developed to perform Bayesian optimal model discrimination design. This approach requires considerably fewer simulations from the candidate models than previous approaches using approximate Bayesian computation. Further, it is easy to assess the performance of the optimal design through the misclassification error rate. The approach is particularly useful in the presence of models with intractable likelihoods but can also provide computational advantages when the likelihoods are manageable.

          Supplementary Information

          The online version contains supplementary material available at 10.1007/s11222-022-10078-2.

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              Bayesian measures of model complexity and fit

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                Author and article information

                Contributors
                markus.hainy@jku.at
                Journal
                Stat Comput
                Stat Comput
                Statistics and Computing
                Springer US (New York )
                0960-3174
                1573-1375
                22 February 2022
                22 February 2022
                2022
                : 32
                : 2
                : 25
                Affiliations
                [1 ]GRID grid.9970.7, ISNI 0000 0001 1941 5140, Department of Applied Statistics, , Johannes Kepler University, ; 4040 Linz, Austria
                [2 ]GRID grid.1024.7, ISNI 0000000089150953, School of Mathematical Sciences, Queensland University of Technology, ; Brisbane, QLD 4000 Australia
                [3 ]GRID grid.1008.9, ISNI 0000 0001 2179 088X, Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, , The University of Melbourne, ; Melbourne, VIC 3010 Australia
                [4 ]GRID grid.1008.9, ISNI 0000 0001 2179 088X, The Department of Infectious Diseases at The Peter Doherty Institute for Infection and Immunity, , The University of Melbourne and Royal Melbourne Hospital, ; Melbourne, VIC 3000 Australia
                [5 ]GRID grid.5335.0, ISNI 0000000121885934, Department of Veterinary Medicine, University of Cambridge, ; Cambridgeshire, CB3 0ES United Kingdom
                [6 ]GRID grid.503031.4, ARC Centre of Excellence for Mathematical & Statistical Frontiers, ; Melbourne, Australia
                [7 ]GRID grid.1024.7, ISNI 0000000089150953, QUT Centre for Data Science, ; Brisbane, Australia
                Author information
                http://orcid.org/0000-0003-4834-0250
                http://orcid.org/0000-0003-0076-3123
                http://orcid.org/0000-0001-9158-853X
                http://orcid.org/0000-0001-9222-8763
                Article
                10078
                10.1007/s11222-022-10078-2
                8924111
                5dc14d59-e75f-4b16-9933-d69b9a95cd2f
                © The Author(s) 2022

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 11 July 2019
                : 20 January 2022
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100002428, Austrian Science Fund;
                Award ID: J3959-N32
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100000268, Biotechnology and Biological Sciences Research Council;
                Award ID: BB/M020193/1
                Award Recipient :
                Funded by: Australian Research Council
                Award ID: DE160100741
                Award Recipient :
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                © Springer Science+Business Media, LLC, part of Springer Nature 2022

                approximate bayesian computation,bayesian model selection,classification and regression tree,continuous-time markov process,random forest,simulation-based bayesian experimental design

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