Ardi Tampuu:
ORCID: http://orcid.org/0000-0002-2120-1712
Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole:
MethodologyRole: SoftwareRole: ValidationRole: VisualizationRole: Writing – original
draftRole: Writing – review & editing
Zurab Bzhalava: Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole:
MethodologyRole: SoftwareRole: ValidationRole: VisualizationRole: Writing – original
draftRole: Writing – review & editing
Joakim Dillner: Role: Funding acquisitionRole: Project administrationRole: ResourcesRole: SupervisionRole:
ValidationRole: Writing – review & editing
Raul Vicente: Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
ResourcesRole: SupervisionRole: ValidationRole: Writing – original draft
Ulrich Melcher: Role: Editor
Journal ID (nlm-ta): PLoS One
Journal ID (iso-abbrev): PLoS ONE
Journal ID (publisher-id): plos
Journal ID (pmc): plosone
Title:
PLoS ONE
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Electronic):
1932-6203
Publication date Collection: 2019
Publication date
(Electronic):
11
September
2019
Volume: 14
Issue: 9
Electronic Location Identifier: e0222271
Affiliations
[1
]
Computational Neuroscience Lab, Institute of Computer Science, University of Tartu,
Tartu, Estonia
[2
]
Department of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden
[3
]
Karolinska University Laboratory, Karolinska University Hospital, Stockholm, Sweden
Oklahoma State University, UNITED STATES
Author notes
Competing Interests: The authors have declared that no competing interests exist.
Author information
Article
Publisher ID:
PONE-D-19-16058
DOI: 10.1371/journal.pone.0222271
PMC ID: 6738585
PubMed ID: 31509583
SO-VID: 5e45d659-425b-4302-ade6-f3065e309cc6
Copyright © © 2019 Tampuu et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
Funded by: funder-id http://dx.doi.org/10.13039/501100002301, Eesti Teadusagentuur;
Award ID: PUT 1476
Award Recipient
:
Raul Vicente
Funded by: Estonian Center of Excellence in IT
Award ID: TK148
Award Recipient
:
Raul Vicente
Funded by: funder-id http://dx.doi.org/10.13039/501100001729, Stiftelsen för Strategisk Forskning;
Award ID: RB13-0011
Award Recipient
:
Joakim Dillner
Funded by: funder-id http://dx.doi.org/10.13039/501100004785, NordForsk;
Award ID: 62721
Award Recipient
:
Joakim Dillner
Funded by: funder-id http://dx.doi.org/10.13039/501100004359, Vetenskapsrådet;
Award ID: 2017-01841_3
Award Recipient
:
Joakim Dillner
ZB and JD were supported by three sources: 1) awarded to JD: Swedish Foundation for
Strategic Research, Proj. no RB13-0011,
https://strategiska.se/en/; 2) awarded to JD: NordForsk, Proj no 62721,
https://www.nordforsk.org/en?set_language=en; 3) awarded to JD: Swedish Research Council, Proj no 2017-01841_3,
https://www.vr.se/english.html. AT and RV were supported by Estonian Research Council, project number PUT 1476 (
https://www.etis.ee/Portal/Projects/Display/52ed4301-f2ef-4364-9770-397e31936f93?lang=ENG) and Estonian Centre of Excellence in IT (EXCITE) project number TK148 (
https://www.etis.ee/Portal/Projects/Display/fd0aeffa-a7d3-4191-b468-0f44aa2847af?lang=ENG). The funders had no role in study design, data collection and analysis, decision
to publish, or preparation of the manuscript.
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Metagenomics
Subject:
Research and Analysis Methods
Subject:
Database and Informatics Methods
Subject:
Bioinformatics
Subject:
Sequence Analysis
Subject:
Sequence Alignment
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Microbial Genomics
Subject:
Viral Genomics
Subject:
Viral Genome
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Microbial Genomics
Subject:
Viral Genomics
Subject:
Viral Genome
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Virology
Subject:
Viral Genomics
Subject:
Viral Genome
Subject:
Research and analysis methods
Subject:
Database and informatics methods
Subject:
Bioinformatics
Subject:
Sequence analysis
Subject:
BLAST algorithm
Subject:
Biology and life sciences
Subject:
Molecular biology
Subject:
Molecular biology techniques
Subject:
Molecular biology assays and analysis techniques
Subject:
DNA filter assay
Subject:
Research and analysis methods
Subject:
Molecular biology techniques
Subject:
Molecular biology assays and analysis techniques
Subject:
DNA filter assay
Subject:
Research and analysis methods
Subject:
Database and informatics methods
Subject:
Bioinformatics
Subject:
Sequence analysis
Subject:
DNA sequence analysis
Subject:
Computer and Information Sciences
Subject:
Neural Networks
Subject:
Biology and Life Sciences
Subject:
Neuroscience
Subject:
Neural Networks
Subject:
Computer and Information Sciences
Subject:
Artificial Intelligence
Subject:
Machine Learning