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      Association of phospholipase A2 receptor 1 polymorphisms with idiopathic membranous nephropathy in Chinese patients in Taiwan

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          Abstract

          Background

          Idiopathic membranous nephropathy (IMN) is one of the most common forms of autoimmune nephritic syndrome in adults. The purpose of this study is to evaluate whether polymorphisms of PLA2R1 affect the development of IMN.

          Methods

          Taiwanese-Chinese individuals (129 patients with IMN and 106 healthy controls) were enrolled in this study. The selected single nucleotide polymorphisms (SNPs) in PLA2R1 were genotyped by real-time polymerase chain reaction using TaqMan fluorescent probes, and were further confirmed by polymerase chain reaction-restriction fragment length polymorphism. The roles of the SNPs in disease progression were analyzed.

          Results

          Genotype distribution was significantly different between patients with IMN and controls for PLA2R1 SNP rs35771982 ( p = 0.015). The frequency of G allele at rs35771982 was significantly higher in patients with IMN as compared with controls ( p = 0.005). In addition, haplotypes of PLA2R1 may be used to predict the risk of IMN ( p = 0.004). Haplotype H1 plays a role in an increased risk of IMN while haplotype H3 plays a protective role against this disease. None of these polymorphisms showed a significant and independent influence on the progression of IMN and the risk of end-stage renal failure and death (ESRF/death). High disease progression in patients having C/T genotype at rs6757188 and C/G genotype at rs35771982 were associated with a low rate of remission.

          Conclusions

          Our results provide new evidence that genetic polymorphisms of PLA2R1 may be the underlying cause of IMN, and the polymorphisms revealed by this study warrant further investigation.

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          Most cited references23

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          Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms.

          Haplotypes have gained increasing attention in the mapping of complex-disease genes, because of the abundance of single-nucleotide polymorphisms (SNPs) and the limited power of conventional single-locus analyses. It has been shown that haplotype-inference methods such as Clark's algorithm, the expectation-maximization algorithm, and a coalescence-based iterative-sampling algorithm are fairly effective and economical alternatives to molecular-haplotyping methods. To contend with some weaknesses of the existing algorithms, we propose a new Monte Carlo approach. In particular, we first partition the whole haplotype into smaller segments. Then, we use the Gibbs sampler both to construct the partial haplotypes of each segment and to assemble all the segments together. Our algorithm can accurately and rapidly infer haplotypes for a large number of linked SNPs. By using a wide variety of real and simulated data sets, we demonstrate the advantages of our Bayesian algorithm, and we show that it is robust to the violation of Hardy-Weinberg equilibrium, to the presence of missing data, and to occurrences of recombination hotspots.
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            Structure and function of podocytes: an update.

            Glomerular visceral epithelial cells, also termed podocytes, are highly specialized epithelial cells that cover the outer aspect of the glomerular basement membrane. Recent studies point to an important role of podocytes in the physiology and pathophysiology of the glomerulus. This review summarizes the structure-function relationships of podocytes. Following a description of the general morphology of podocytes, the technical problems associated with studying these cells are discussed. A survey of podocyte function forms the center of this review. Finally, selected aspects of podocyte development and cell division are discussed.
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              Receptors for a growing family of secreted phospholipases A2.

              G Lambeau (1999)
              Phospholipases A2 (PLA2s) are enzymes that catalyse the hydrolysis of the sn-2 acyl bond of glycerophospholipids to produce free fatty acids and lysophospholipids. Numerous intracellular and secreted PLA2s (sPLA2s) have now been characterized. Because PLA2 products are important for cell signalling and the biosynthesis of biologically active lipids, including eicosanoids and platelet-activating factor, PLA2s are generally considered as key enzymes that control the release of lipid mediator precursors. However, the increasing number of mammalian sPLA2s and the recent identification of different membrane proteins that bind sPLA2s makes it likely that these enzymes also behave as ligands for receptors, and that their physiological function is not limited to their catalytic activity. Here, the current state of awareness regarding the different types of sPLA2-binding proteins is described. To date, five distinct mammalian sPLA2s and two main types (M and N) of sPLA2 receptors have been identified. Because most is known about the M-type receptor, particular attention will be paid to it, including a description of it molecular properties and of its possible biological roles with regard to sPLA2 function.
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                Author and article information

                Journal
                J Biomed Sci
                Journal of Biomedical Science
                BioMed Central
                1021-7770
                1423-0127
                2010
                11 October 2010
                : 17
                : 1
                : 81
                Affiliations
                [1 ]Department of Medical Genetics and Medical Research, China Medical University Hospital, Taichung, Taiwan
                [2 ]School of Chinese Medicine, China Medical University, Taichung, Taiwan
                [3 ]Division of Nephrology, Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan
                [4 ]Department of Pediatrics, China Medical University Hospital, Taichung, Taiwan
                [5 ]Asia University, Taichung, Taiwan
                [6 ]Department of Health and Nutrition Biotechnology, Asia University, Taichung, Taiwan
                [7 ]School of Post-Baccalaureate Chinese Medicine, China Medical University, Taichung, Taiwan
                [8 ]Department of Biotechnology, Asia University, Taichung, Taiwan
                [9 ]Department of Biotechnology and Bioinformatics, Asia University, Taichung, Taiwan
                Article
                1423-0127-17-81
                10.1186/1423-0127-17-81
                2959017
                20937089
                5fe2a34d-b0cd-4b14-8cc2-7798304b7acd
                Copyright ©2010 Liu et al; licensee BioMed Central Ltd.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 1 February 2010
                : 11 October 2010
                Categories
                Research

                Molecular medicine
                Molecular medicine

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