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      A Nonlinear Causality Estimator Based on Non-Parametric Multiplicative Regression

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          Abstract

          Causal prediction has become a popular tool for neuroscience applications, as it allows the study of relationships between different brain areas during rest, cognitive tasks or brain disorders. We propose a nonparametric approach for the estimation of nonlinear causal prediction for multivariate time series. In the proposed estimator, C NPMR , Autoregressive modeling is replaced by Nonparametric Multiplicative Regression (NPMR). NPMR quantifies interactions between a response variable (effect) and a set of predictor variables (cause); here, we modified NPMR for model prediction. We also demonstrate how a particular measure, the sensitivity Q, could be used to reveal the structure of the underlying causal relationships. We apply C NPMR on artificial data with known ground truth (5 datasets), as well as physiological data (2 datasets). C NPMR correctly identifies both linear and nonlinear causal connections that are present in the artificial data, as well as physiologically relevant connectivity in the real data, and does not seem to be affected by filtering. The Sensitivity measure also provides useful information about the latent connectivity.The proposed estimator addresses many of the limitations of linear Granger causality and other nonlinear causality estimators. C NPMR is compared with pairwise and conditional Granger causality (linear) and Kernel-Granger causality (nonlinear). The proposed estimator can be applied to pairwise or multivariate estimations without any modifications to the main method. Its nonpametric nature, its ability to capture nonlinear relationships and its robustness to filtering make it appealing for a number of applications.

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          Most cited references38

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          Predicting chaotic time series.

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            Evaluating causal relations in neural systems: granger causality, directed transfer function and statistical assessment of significance.

            We consider the question of evaluating causal relations among neurobiological signals. In particular, we study the relation between the directed transfer function (DTF) and the well-accepted Granger causality, and show that DTF can be interpreted within the framework of Granger causality. In addition, we propose a method to assess the significance of causality measures. Finally, we demonstrate the applications of these measures to simulated data and actual neurobiological recordings.
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              • Record: found
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              Causal relationship between energy consumption and GDP revisited: the case of Korea 1970–1999

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                Author and article information

                Contributors
                Journal
                Front Neuroinform
                Front Neuroinform
                Front. Neuroinform.
                Frontiers in Neuroinformatics
                Frontiers Media S.A.
                1662-5196
                14 June 2016
                2016
                : 10
                : 19
                Affiliations
                Department of Electrical and Electronic Engineering, Imperial College London London, UK
                Author notes

                Edited by: Sean L. Hill, École Polytechnique Fédérale de Lausanne, Switzerland

                Reviewed by: Thomas Natschläger, Software Competence Center Hagenberg GmbH, Austria; Nianming Zuo, Chinese Academy of Sciences, China

                *Correspondence: Nicoletta Nicolaou n.nicolaou@ 123456imperial.ac.uk
                Article
                10.3389/fninf.2016.00019
                4905976
                27378901
                65d75491-7923-4788-87f7-f810a054d7c0
                Copyright © 2016 Nicolaou and Constandinou.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 05 February 2016
                : 31 May 2016
                Page count
                Figures: 12, Tables: 1, Equations: 16, References: 59, Pages: 21, Words: 12844
                Funding
                Funded by: Research Executive Agency 10.13039/501100000783
                Award ID: 623767
                Categories
                Neuroscience
                Methods

                Neurosciences
                nonparametric multiplicative regression,nonlinear causality,nonparametric causality,multivariate causality,conditional causality

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