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      FANCD2 and REV1 cooperate in the protection of nascent DNA strands in response to replication stress

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          Abstract

          REV1 is a eukaryotic member of the Y-family of DNA polymerases involved in translesion DNA synthesis and genome mutagenesis. Recently, REV1 is also found to function in homologous recombination. However, it remains unclear how REV1 is recruited to the sites where homologous recombination is processed. Here, we report that loss of mammalian REV1 results in a specific defect in replication-associated gene conversion. We found that REV1 is targeted to laser-induced DNA damage stripes in a manner dependent on its ubiquitin-binding motifs, on RAD18, and on monoubiquitinated FANCD2 (FANCD2-mUb) that associates with REV1. Expression of a FANCD2-Ub chimeric protein in RAD18-depleted cells enhances REV1 assembly at laser-damaged sites, suggesting that FANCD2-mUb functions downstream of RAD18 to recruit REV1 to DNA breaks. Consistent with this suggestion we found that REV1 and FANCD2 are epistatic with respect to sensitivity to the double-strand break-inducer camptothecin. REV1 enrichment at DNA damage stripes also partially depends on BRCA1 and BRCA2, components of the FANCD2/BRCA supercomplex. Intriguingly, analogous to FANCD2-mUb and BRCA1/BRCA2, REV1 plays an unexpected role in protecting nascent replication tracts from degradation by stabilizing RAD51 filaments. Collectively these data suggest that REV1 plays multiple roles at stalled replication forks in response to replication stress.

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          Most cited references50

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          Y-family DNA polymerases and their role in tolerance of cellular DNA damage.

          The past 15 years have seen an explosion in our understanding of how cells replicate damaged DNA and how this can lead to mutagenesis. The Y-family DNA polymerases lie at the heart of this process, which is commonly known as translesion synthesis. This family of polymerases has unique features that enable them to synthesize DNA past damaged bases. However, as they exhibit low fidelity when copying undamaged DNA, it is essential that they are only called into play when they are absolutely required. Several layers of regulation ensure that this is achieved.
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            Rad51 protects nascent DNA from Mre11 dependent degradation and promotes continuous DNA synthesis

            The role of Rad51 in an unperturbed cell cycle has been difficult to dissect from its DNA repair function. Here, using electron microscopy (EM) to visualize replication intermediates (RIs) assembled in Xenopus laevis egg extract we show that Rad51 is required to prevent the accumulation of ssDNA gaps at replication forks and behind them. ssDNA gaps at forks arise from extended uncoupling of leading and lagging strand DNA synthesis. Instead, ssDNA gaps behind forks, which are exacerbated on damaged templates, result from Mre11 dependent degradation of newly synthesized DNA strands as they can be suppressed by inhibition of Mre11 nuclease activity. These findings reveal direct and unanticipated roles for Rad51 at replication forks demonstrating that Rad51 protects newly synthesised DNA from Mre11 dependent degradation and promotes continuous DNA synthesis.
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              Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis.

              Translesion synthesis (TLS) is the major pathway by which mammalian cells replicate across DNA lesions. Upon DNA damage, ubiquitination of proliferating cell nuclear antigen (PCNA) induces bypass of the lesion by directing the replication machinery into the TLS pathway. Yet, how this modification is recognized and interpreted in the cell remains unclear. Here we describe the identification of two ubiquitin (Ub)-binding domains (UBM and UBZ), which are evolutionarily conserved in all Y-family TLS polymerases (pols). These domains are required for binding of poleta and poliota to ubiquitin, their accumulation in replication factories, and their interaction with monoubiquitinated PCNA. Moreover, the UBZ domain of poleta is essential to efficiently restore a normal response to ultraviolet irradiation in xeroderma pigmentosum variant (XP-V) fibroblasts. Our results indicate that Ub-binding domains of Y-family polymerases play crucial regulatory roles in TLS.
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                Author and article information

                Journal
                Nucleic Acids Res
                Nucleic Acids Res
                nar
                nar
                Nucleic Acids Research
                Oxford University Press
                0305-1048
                1362-4962
                30 September 2015
                17 July 2015
                17 July 2015
                : 43
                : 17
                : 8325-8339
                Affiliations
                [1 ]Key Laboratory of Genomics and Precision Medicine, China Gastrointestinal Cancer Research Center, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
                [2 ]State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
                [3 ]Department of Human Genetics, Leiden University Medical Center, 2300 RC, Leiden, The Netherlands
                [4 ]Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX 75390, USA
                [5 ]Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China
                [6 ]Department of Chemistry and Biochemistry, California State University Northridge, Northridge, CA 91330-8262, USA
                [7 ]Department of Pathology, UT Southwestern Medical Center, Dallas, TX 75390, USA
                Author notes
                [* ]To whom correspondence should be addressed. Tel: +86 10 84097646; Fax: +86 10 84097720; Email: guocx@ 123456big.ac.cn
                Correspondence may also be addressed to Tie-Shan Tang. Tel: +86 10 64807296; Fax: +86 10 64807296; Email: tangtsh@ 123456ioz.ac.cn
                []These authors contributed equally to the paper as first authors.
                Article
                10.1093/nar/gkv737
                4787816
                26187992
                6606e19a-a35f-4c51-adfe-7bd74062654e
                © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/3.0/),which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

                History
                : 08 July 2015
                : 06 July 2015
                : 02 January 2015
                Page count
                Pages: 15
                Categories
                Genome Integrity, Repair and Replication
                Custom metadata
                30 September 2015

                Genetics
                Genetics

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